Protein–RNA interactions for Protein: Q8WVM7

STAG1, Cohesin subunit SA-1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG1Q8WVM7 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
STAG1Q8WVM7 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
STAG1Q8WVM7 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
STAG1Q8WVM7 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
STAG1Q8WVM7 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
STAG1Q8WVM7 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
STAG1Q8WVM7 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
STAG1Q8WVM7 WARS-203ENST00000358655 2466 ntTSL 2 BASIC17.26■□□□□ 0.35
STAG1Q8WVM7 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
STAG1Q8WVM7 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
STAG1Q8WVM7 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
STAG1Q8WVM7 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
STAG1Q8WVM7 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC17.26■□□□□ 0.35
STAG1Q8WVM7 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
STAG1Q8WVM7 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC17.25■□□□□ 0.35
STAG1Q8WVM7 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
STAG1Q8WVM7 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
STAG1Q8WVM7 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
STAG1Q8WVM7 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
STAG1Q8WVM7 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC17.25■□□□□ 0.35
STAG1Q8WVM7 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
STAG1Q8WVM7 AC011498.7-201ENST00000624986 2027 ntBASIC17.25■□□□□ 0.35
STAG1Q8WVM7 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
STAG1Q8WVM7 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC17.25■□□□□ 0.35
STAG1Q8WVM7 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
STAG1Q8WVM7 AL161932.2-201ENST00000435436 679 ntBASIC17.25■□□□□ 0.35
STAG1Q8WVM7 ST13P19-201ENST00000442505 1124 ntBASIC17.25■□□□□ 0.35
STAG1Q8WVM7 AC005077.2-201ENST00000449786 690 ntBASIC17.25■□□□□ 0.35
STAG1Q8WVM7 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC17.25■□□□□ 0.35
STAG1Q8WVM7 EIF4HP1-201ENST00000453115 687 ntBASIC17.25■□□□□ 0.35
STAG1Q8WVM7 REEP1-202ENST00000453231 940 ntTSL 2 BASIC17.25■□□□□ 0.35
STAG1Q8WVM7 AC106794.1-201ENST00000506935 792 ntBASIC17.25■□□□□ 0.35
STAG1Q8WVM7 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC17.25■□□□□ 0.35
STAG1Q8WVM7 AC005740.2-201ENST00000511085 419 ntBASIC17.25■□□□□ 0.35
STAG1Q8WVM7 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC17.25■□□□□ 0.35
STAG1Q8WVM7 FADS2-212ENST00000522639 360 ntTSL 5 BASIC17.25■□□□□ 0.35
STAG1Q8WVM7 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC17.25■□□□□ 0.35
STAG1Q8WVM7 AC003686.1-201ENST00000550956 1034 ntBASIC17.25■□□□□ 0.35
STAG1Q8WVM7 FADS2-215ENST00000574708 385 ntTSL 3 BASIC17.25■□□□□ 0.35
STAG1Q8WVM7 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC17.25■□□□□ 0.35
STAG1Q8WVM7 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC17.25■□□□□ 0.35
STAG1Q8WVM7 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
STAG1Q8WVM7 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
STAG1Q8WVM7 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
STAG1Q8WVM7 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
STAG1Q8WVM7 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC17.25■□□□□ 0.35
STAG1Q8WVM7 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
STAG1Q8WVM7 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC17.25■□□□□ 0.35
STAG1Q8WVM7 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
STAG1Q8WVM7 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
STAG1Q8WVM7 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
STAG1Q8WVM7 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
STAG1Q8WVM7 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC17.24■□□□□ 0.35
STAG1Q8WVM7 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
STAG1Q8WVM7 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
STAG1Q8WVM7 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
STAG1Q8WVM7 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
STAG1Q8WVM7 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
STAG1Q8WVM7 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
STAG1Q8WVM7 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
STAG1Q8WVM7 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
STAG1Q8WVM7 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
STAG1Q8WVM7 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
STAG1Q8WVM7 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
STAG1Q8WVM7 KRT18P36-201ENST00000411618 1276 ntBASIC17.24■□□□□ 0.35
STAG1Q8WVM7 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC17.24■□□□□ 0.35
STAG1Q8WVM7 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
STAG1Q8WVM7 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC17.24■□□□□ 0.35
STAG1Q8WVM7 AC005586.2-201ENST00000563946 837 ntBASIC17.24■□□□□ 0.35
STAG1Q8WVM7 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC17.24■□□□□ 0.35
STAG1Q8WVM7 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
STAG1Q8WVM7 AC138649.2-201ENST00000615886 705 ntBASIC17.24■□□□□ 0.35
STAG1Q8WVM7 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
STAG1Q8WVM7 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
STAG1Q8WVM7 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
STAG1Q8WVM7 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
STAG1Q8WVM7 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
STAG1Q8WVM7 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
STAG1Q8WVM7 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
STAG1Q8WVM7 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
STAG1Q8WVM7 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC17.24■□□□□ 0.35
STAG1Q8WVM7 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
STAG1Q8WVM7 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
STAG1Q8WVM7 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
STAG1Q8WVM7 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
STAG1Q8WVM7 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
STAG1Q8WVM7 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
STAG1Q8WVM7 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC17.23■□□□□ 0.35
STAG1Q8WVM7 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
STAG1Q8WVM7 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
STAG1Q8WVM7 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC17.23■□□□□ 0.35
STAG1Q8WVM7 AC007191.1-201ENST00000623179 2995 ntBASIC17.23■□□□□ 0.35
STAG1Q8WVM7 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
STAG1Q8WVM7 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC17.23■□□□□ 0.35
STAG1Q8WVM7 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC17.23■□□□□ 0.35
STAG1Q8WVM7 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC17.23■□□□□ 0.35
STAG1Q8WVM7 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC17.23■□□□□ 0.35
STAG1Q8WVM7 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC17.23■□□□□ 0.35
STAG1Q8WVM7 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
STAG1Q8WVM7 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms