Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
CLDND2Q8NHS1 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CLDND2Q8NHS1 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
CLDND2Q8NHS1 STK33-217ENST00000534493 1895 ntTSL 2 BASIC12.59□□□□□ -0.39
CLDND2Q8NHS1 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
CLDND2Q8NHS1 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
CLDND2Q8NHS1 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CLDND2Q8NHS1 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
CLDND2Q8NHS1 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
CLDND2Q8NHS1 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
CLDND2Q8NHS1 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CLDND2Q8NHS1 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CLDND2Q8NHS1 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
CLDND2Q8NHS1 ZBED1P1-201ENST00000502364 1930 ntBASIC12.59□□□□□ -0.39
CLDND2Q8NHS1 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CLDND2Q8NHS1 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CLDND2Q8NHS1 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CLDND2Q8NHS1 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
CLDND2Q8NHS1 KCP-203ENST00000610776 5108 ntTSL 5 BASIC12.59□□□□□ -0.39
CLDND2Q8NHS1 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
CLDND2Q8NHS1 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
CLDND2Q8NHS1 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CLDND2Q8NHS1 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC12.59□□□□□ -0.39
CLDND2Q8NHS1 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CLDND2Q8NHS1 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CLDND2Q8NHS1 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CLDND2Q8NHS1 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
CLDND2Q8NHS1 KRTAP10-13P-201ENST00000412914 571 ntBASIC12.59□□□□□ -0.39
CLDND2Q8NHS1 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC12.59□□□□□ -0.39
CLDND2Q8NHS1 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC12.59□□□□□ -0.39
CLDND2Q8NHS1 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC12.59□□□□□ -0.39
CLDND2Q8NHS1 HSPB1P2-201ENST00000448722 546 ntBASIC12.59□□□□□ -0.39
CLDND2Q8NHS1 APOA2-204ENST00000464492 530 ntTSL 3 BASIC12.59□□□□□ -0.39
CLDND2Q8NHS1 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC12.59□□□□□ -0.39
CLDND2Q8NHS1 ARTN-209ENST00000479128 471 ntTSL 3 BASIC12.59□□□□□ -0.39
CLDND2Q8NHS1 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC12.59□□□□□ -0.39
CLDND2Q8NHS1 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC12.59□□□□□ -0.39
CLDND2Q8NHS1 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC12.59□□□□□ -0.39
CLDND2Q8NHS1 AC106820.3-201ENST00000561653 397 ntBASIC12.59□□□□□ -0.39
CLDND2Q8NHS1 DUX4L47-201ENST00000566374 394 ntBASIC12.59□□□□□ -0.39
CLDND2Q8NHS1 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC12.59□□□□□ -0.39
CLDND2Q8NHS1 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC12.59□□□□□ -0.39
CLDND2Q8NHS1 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
CLDND2Q8NHS1 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CLDND2Q8NHS1 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CLDND2Q8NHS1 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC12.59□□□□□ -0.39
CLDND2Q8NHS1 AC073413.1-201ENST00000603927 732 ntBASIC12.59□□□□□ -0.39
CLDND2Q8NHS1 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC12.59□□□□□ -0.39
CLDND2Q8NHS1 ZACNP1-201ENST00000612259 710 ntBASIC12.59□□□□□ -0.39
CLDND2Q8NHS1 AC244157.2-201ENST00000616239 1006 ntBASIC12.59□□□□□ -0.39
CLDND2Q8NHS1 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CLDND2Q8NHS1 AL139099.5-201ENST00000635274 300 ntBASIC12.59□□□□□ -0.39
CLDND2Q8NHS1 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
CLDND2Q8NHS1 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CLDND2Q8NHS1 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
CLDND2Q8NHS1 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CLDND2Q8NHS1 AL157414.3-201ENST00000624276 1954 ntBASIC12.59□□□□□ -0.39
CLDND2Q8NHS1 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC12.59□□□□□ -0.39
CLDND2Q8NHS1 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC12.59□□□□□ -0.39
CLDND2Q8NHS1 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC12.59□□□□□ -0.39
CLDND2Q8NHS1 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC12.59□□□□□ -0.39
CLDND2Q8NHS1 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CLDND2Q8NHS1 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
CLDND2Q8NHS1 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
CLDND2Q8NHS1 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
CLDND2Q8NHS1 AL360270.3-201ENST00000609118 1348 ntBASIC12.59□□□□□ -0.39
CLDND2Q8NHS1 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CLDND2Q8NHS1 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
CLDND2Q8NHS1 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC12.59□□□□□ -0.39
CLDND2Q8NHS1 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
CLDND2Q8NHS1 KRT8P4-201ENST00000509735 1454 ntBASIC12.59□□□□□ -0.39
CLDND2Q8NHS1 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC12.59□□□□□ -0.39
CLDND2Q8NHS1 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CLDND2Q8NHS1 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CLDND2Q8NHS1 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.39
CLDND2Q8NHS1 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
CLDND2Q8NHS1 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.39
CLDND2Q8NHS1 TKT-201ENST00000296289 1931 ntTSL 5 BASIC12.58□□□□□ -0.39
CLDND2Q8NHS1 MBLAC2-202ENST00000514906 1936 ntBASIC12.58□□□□□ -0.39
CLDND2Q8NHS1 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
CLDND2Q8NHS1 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC12.58□□□□□ -0.39
CLDND2Q8NHS1 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
CLDND2Q8NHS1 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC12.58□□□□□ -0.4
CLDND2Q8NHS1 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
CLDND2Q8NHS1 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CLDND2Q8NHS1 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CLDND2Q8NHS1 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CLDND2Q8NHS1 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CLDND2Q8NHS1 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
CLDND2Q8NHS1 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
CLDND2Q8NHS1 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
CLDND2Q8NHS1 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CLDND2Q8NHS1 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC12.58□□□□□ -0.4
CLDND2Q8NHS1 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC12.58□□□□□ -0.4
CLDND2Q8NHS1 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
CLDND2Q8NHS1 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC12.58□□□□□ -0.4
CLDND2Q8NHS1 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC12.58□□□□□ -0.4
CLDND2Q8NHS1 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC12.58□□□□□ -0.4
CLDND2Q8NHS1 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC12.58□□□□□ -0.4
CLDND2Q8NHS1 NDUFAB1P1-201ENST00000404262 460 ntBASIC12.58□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms