Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
SIMC1Q8NDZ2 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
SIMC1Q8NDZ2 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
SIMC1Q8NDZ2 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC13.96□□□□□ -0.18
SIMC1Q8NDZ2 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
SIMC1Q8NDZ2 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC13.96□□□□□ -0.18
SIMC1Q8NDZ2 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC13.96□□□□□ -0.18
SIMC1Q8NDZ2 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC13.95□□□□□ -0.18
SIMC1Q8NDZ2 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC13.95□□□□□ -0.18
SIMC1Q8NDZ2 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC13.95□□□□□ -0.18
SIMC1Q8NDZ2 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
SIMC1Q8NDZ2 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
SIMC1Q8NDZ2 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SIMC1Q8NDZ2 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
SIMC1Q8NDZ2 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SIMC1Q8NDZ2 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SIMC1Q8NDZ2 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC13.95□□□□□ -0.18
SIMC1Q8NDZ2 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
SIMC1Q8NDZ2 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SIMC1Q8NDZ2 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC13.95□□□□□ -0.18
SIMC1Q8NDZ2 AC087386.2-201ENST00000623212 4637 ntBASIC13.95□□□□□ -0.18
SIMC1Q8NDZ2 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
SIMC1Q8NDZ2 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SIMC1Q8NDZ2 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SIMC1Q8NDZ2 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SIMC1Q8NDZ2 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SIMC1Q8NDZ2 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SIMC1Q8NDZ2 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SIMC1Q8NDZ2 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC13.95□□□□□ -0.18
SIMC1Q8NDZ2 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC13.95□□□□□ -0.18
SIMC1Q8NDZ2 HIST1H2BPS3-201ENST00000419683 341 ntBASIC13.95□□□□□ -0.18
SIMC1Q8NDZ2 USB1-202ENST00000423271 1217 ntTSL 2 BASIC13.95□□□□□ -0.18
SIMC1Q8NDZ2 AC016694.1-201ENST00000434179 700 ntBASIC13.95□□□□□ -0.18
SIMC1Q8NDZ2 MESTP3-201ENST00000503460 968 ntBASIC13.95□□□□□ -0.18
SIMC1Q8NDZ2 RPL8-205ENST00000527914 551 ntTSL 3 BASIC13.95□□□□□ -0.18
SIMC1Q8NDZ2 KRT17P8-201ENST00000540749 863 ntBASIC13.95□□□□□ -0.18
SIMC1Q8NDZ2 KRT90P-201ENST00000549264 1064 ntBASIC13.95□□□□□ -0.18
SIMC1Q8NDZ2 AL512343.1-201ENST00000605837 169 ntBASIC13.95□□□□□ -0.18
SIMC1Q8NDZ2 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC13.95□□□□□ -0.18
SIMC1Q8NDZ2 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC13.95□□□□□ -0.18
SIMC1Q8NDZ2 AC132938.4-201ENST00000623835 848 ntBASIC13.95□□□□□ -0.18
SIMC1Q8NDZ2 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SIMC1Q8NDZ2 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SIMC1Q8NDZ2 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
SIMC1Q8NDZ2 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC13.95□□□□□ -0.18
SIMC1Q8NDZ2 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
SIMC1Q8NDZ2 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC13.95□□□□□ -0.18
SIMC1Q8NDZ2 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SIMC1Q8NDZ2 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
SIMC1Q8NDZ2 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SIMC1Q8NDZ2 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SIMC1Q8NDZ2 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
SIMC1Q8NDZ2 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
SIMC1Q8NDZ2 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC13.95□□□□□ -0.18
SIMC1Q8NDZ2 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SIMC1Q8NDZ2 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC13.95□□□□□ -0.18
SIMC1Q8NDZ2 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SIMC1Q8NDZ2 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC13.95□□□□□ -0.18
SIMC1Q8NDZ2 AC007326.2-201ENST00000624224 7579 ntBASIC13.95□□□□□ -0.18
SIMC1Q8NDZ2 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC13.95□□□□□ -0.18
SIMC1Q8NDZ2 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SIMC1Q8NDZ2 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SIMC1Q8NDZ2 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC13.95□□□□□ -0.18
SIMC1Q8NDZ2 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SIMC1Q8NDZ2 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC13.95□□□□□ -0.18
SIMC1Q8NDZ2 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
SIMC1Q8NDZ2 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC13.94□□□□□ -0.18
SIMC1Q8NDZ2 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC13.94□□□□□ -0.18
SIMC1Q8NDZ2 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC13.94□□□□□ -0.18
SIMC1Q8NDZ2 FKBP4P6-201ENST00000457486 1332 ntBASIC13.94□□□□□ -0.18
SIMC1Q8NDZ2 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SIMC1Q8NDZ2 LINC01230-201ENST00000625222 3017 ntBASIC13.94□□□□□ -0.18
SIMC1Q8NDZ2 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SIMC1Q8NDZ2 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SIMC1Q8NDZ2 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SIMC1Q8NDZ2 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SIMC1Q8NDZ2 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC13.94□□□□□ -0.18
SIMC1Q8NDZ2 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC13.94□□□□□ -0.18
SIMC1Q8NDZ2 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SIMC1Q8NDZ2 AC118758.2-201ENST00000614242 2813 ntBASIC13.94□□□□□ -0.18
SIMC1Q8NDZ2 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SIMC1Q8NDZ2 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC13.94□□□□□ -0.18
SIMC1Q8NDZ2 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SIMC1Q8NDZ2 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SIMC1Q8NDZ2 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
SIMC1Q8NDZ2 GUK1-206ENST00000366723 845 ntTSL 5 BASIC13.94□□□□□ -0.18
SIMC1Q8NDZ2 CNN2P8-201ENST00000421872 913 ntBASIC13.94□□□□□ -0.18
SIMC1Q8NDZ2 AC007969.1-201ENST00000433675 447 ntBASIC13.94□□□□□ -0.18
SIMC1Q8NDZ2 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC13.94□□□□□ -0.18
SIMC1Q8NDZ2 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
SIMC1Q8NDZ2 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC13.94□□□□□ -0.18
SIMC1Q8NDZ2 RNA5SP486-201ENST00000515961 83 ntBASIC13.94□□□□□ -0.18
SIMC1Q8NDZ2 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
SIMC1Q8NDZ2 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC13.94□□□□□ -0.18
SIMC1Q8NDZ2 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC13.94□□□□□ -0.18
SIMC1Q8NDZ2 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC13.94□□□□□ -0.18
SIMC1Q8NDZ2 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC13.94□□□□□ -0.18
SIMC1Q8NDZ2 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SIMC1Q8NDZ2 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
SIMC1Q8NDZ2 AC138696.2-201ENST00000607376 223 ntBASIC13.94□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms