Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC14.53□□□□□ -0.08
TRIM48Q8IWZ4 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC14.53□□□□□ -0.08
TRIM48Q8IWZ4 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC14.53□□□□□ -0.08
TRIM48Q8IWZ4 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC14.53□□□□□ -0.08
TRIM48Q8IWZ4 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC14.53□□□□□ -0.08
TRIM48Q8IWZ4 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRIM48Q8IWZ4 CDK12-201ENST00000430627 5918 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRIM48Q8IWZ4 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRIM48Q8IWZ4 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRIM48Q8IWZ4 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
TRIM48Q8IWZ4 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRIM48Q8IWZ4 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRIM48Q8IWZ4 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC14.53□□□□□ -0.08
TRIM48Q8IWZ4 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC14.53□□□□□ -0.08
TRIM48Q8IWZ4 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
TRIM48Q8IWZ4 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC14.53□□□□□ -0.08
TRIM48Q8IWZ4 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRIM48Q8IWZ4 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRIM48Q8IWZ4 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRIM48Q8IWZ4 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC14.53□□□□□ -0.08
TRIM48Q8IWZ4 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRIM48Q8IWZ4 AC006486.2-201ENST00000624246 2199 ntBASIC14.53□□□□□ -0.08
TRIM48Q8IWZ4 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC14.53□□□□□ -0.08
TRIM48Q8IWZ4 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC14.53□□□□□ -0.08
TRIM48Q8IWZ4 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
TRIM48Q8IWZ4 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
TRIM48Q8IWZ4 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRIM48Q8IWZ4 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRIM48Q8IWZ4 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRIM48Q8IWZ4 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC14.52□□□□□ -0.08
TRIM48Q8IWZ4 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
TRIM48Q8IWZ4 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC14.52□□□□□ -0.08
TRIM48Q8IWZ4 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRIM48Q8IWZ4 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRIM48Q8IWZ4 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRIM48Q8IWZ4 AC020907.1-201ENST00000616460 1350 ntBASIC14.52□□□□□ -0.08
TRIM48Q8IWZ4 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRIM48Q8IWZ4 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.08
TRIM48Q8IWZ4 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC14.52□□□□□ -0.08
TRIM48Q8IWZ4 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC14.52□□□□□ -0.08
TRIM48Q8IWZ4 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRIM48Q8IWZ4 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRIM48Q8IWZ4 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRIM48Q8IWZ4 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC14.52□□□□□ -0.09
TRIM48Q8IWZ4 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
TRIM48Q8IWZ4 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRIM48Q8IWZ4 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
TRIM48Q8IWZ4 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
TRIM48Q8IWZ4 KRTAP10-13P-201ENST00000412914 571 ntBASIC14.52□□□□□ -0.09
TRIM48Q8IWZ4 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC14.52□□□□□ -0.09
TRIM48Q8IWZ4 POM121L10P-201ENST00000436994 1285 ntBASIC14.52□□□□□ -0.09
TRIM48Q8IWZ4 AC021723.1-201ENST00000486306 515 ntBASIC14.52□□□□□ -0.09
TRIM48Q8IWZ4 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
TRIM48Q8IWZ4 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRIM48Q8IWZ4 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC14.52□□□□□ -0.09
TRIM48Q8IWZ4 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC14.52□□□□□ -0.09
TRIM48Q8IWZ4 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRIM48Q8IWZ4 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
TRIM48Q8IWZ4 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC14.52□□□□□ -0.09
TRIM48Q8IWZ4 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
TRIM48Q8IWZ4 AL008638.5-201ENST00000623814 1298 ntBASIC14.52□□□□□ -0.09
TRIM48Q8IWZ4 AC079781.5-202ENST00000641784 3743 ntBASIC14.52□□□□□ -0.09
TRIM48Q8IWZ4 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRIM48Q8IWZ4 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRIM48Q8IWZ4 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRIM48Q8IWZ4 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRIM48Q8IWZ4 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC14.52□□□□□ -0.09
TRIM48Q8IWZ4 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
TRIM48Q8IWZ4 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRIM48Q8IWZ4 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC14.52□□□□□ -0.09
TRIM48Q8IWZ4 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRIM48Q8IWZ4 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRIM48Q8IWZ4 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC14.52□□□□□ -0.09
TRIM48Q8IWZ4 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRIM48Q8IWZ4 PTENP1-202ENST00000532280 3996 ntBASIC14.51□□□□□ -0.09
TRIM48Q8IWZ4 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC14.51□□□□□ -0.09
TRIM48Q8IWZ4 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRIM48Q8IWZ4 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC14.51□□□□□ -0.09
TRIM48Q8IWZ4 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRIM48Q8IWZ4 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TRIM48Q8IWZ4 AC003102.2-201ENST00000589195 1469 ntBASIC14.51□□□□□ -0.09
TRIM48Q8IWZ4 ACE3P-201ENST00000423435 1973 ntBASIC14.51□□□□□ -0.09
TRIM48Q8IWZ4 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRIM48Q8IWZ4 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC14.51□□□□□ -0.09
TRIM48Q8IWZ4 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRIM48Q8IWZ4 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRIM48Q8IWZ4 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TRIM48Q8IWZ4 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC14.51□□□□□ -0.09
TRIM48Q8IWZ4 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRIM48Q8IWZ4 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRIM48Q8IWZ4 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRIM48Q8IWZ4 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRIM48Q8IWZ4 RN7SKP230-201ENST00000365642 335 ntBASIC14.51□□□□□ -0.09
TRIM48Q8IWZ4 MIR663B-201ENST00000408361 115 ntBASIC14.51□□□□□ -0.09
TRIM48Q8IWZ4 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC14.51□□□□□ -0.09
TRIM48Q8IWZ4 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
TRIM48Q8IWZ4 HNRNPA1P63-201ENST00000427917 963 ntBASIC14.51□□□□□ -0.09
TRIM48Q8IWZ4 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC14.51□□□□□ -0.09
TRIM48Q8IWZ4 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TRIM48Q8IWZ4 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms