Protein–RNA interactions for Protein: Q5VT40

FAM78B, Protein FAM78B, humanhuman

Predictions only

Length 261 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM78BQ5VT40 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
FAM78BQ5VT40 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
FAM78BQ5VT40 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC11.79□□□□□ -0.52
FAM78BQ5VT40 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
FAM78BQ5VT40 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC11.79□□□□□ -0.52
FAM78BQ5VT40 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
FAM78BQ5VT40 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
FAM78BQ5VT40 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC11.79□□□□□ -0.52
FAM78BQ5VT40 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
FAM78BQ5VT40 C15orf39-202ENST00000394987 4430 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
FAM78BQ5VT40 MIR497HG-202ENST00000572453 3838 ntBASIC11.79□□□□□ -0.52
FAM78BQ5VT40 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
FAM78BQ5VT40 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
FAM78BQ5VT40 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
FAM78BQ5VT40 C2-206ENST00000442278 2434 ntTSL 2 BASIC11.79□□□□□ -0.52
FAM78BQ5VT40 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC11.79□□□□□ -0.52
FAM78BQ5VT40 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC11.79□□□□□ -0.52
FAM78BQ5VT40 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC11.79□□□□□ -0.52
FAM78BQ5VT40 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
FAM78BQ5VT40 ZHX1-202ENST00000395571 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
FAM78BQ5VT40 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
FAM78BQ5VT40 CAMKV-209ENST00000477224 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
FAM78BQ5VT40 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
FAM78BQ5VT40 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
FAM78BQ5VT40 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
FAM78BQ5VT40 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
FAM78BQ5VT40 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC11.79□□□□□ -0.52
FAM78BQ5VT40 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
FAM78BQ5VT40 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
FAM78BQ5VT40 HNRNPFP1-201ENST00000391730 1133 ntBASIC11.79□□□□□ -0.52
FAM78BQ5VT40 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
FAM78BQ5VT40 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC11.79□□□□□ -0.52
FAM78BQ5VT40 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC11.79□□□□□ -0.52
FAM78BQ5VT40 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC11.79□□□□□ -0.52
FAM78BQ5VT40 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC11.79□□□□□ -0.52
FAM78BQ5VT40 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
FAM78BQ5VT40 SERBP1P3-201ENST00000459980 809 ntBASIC11.79□□□□□ -0.52
FAM78BQ5VT40 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC11.79□□□□□ -0.52
FAM78BQ5VT40 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC11.79□□□□□ -0.52
FAM78BQ5VT40 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC11.79□□□□□ -0.52
FAM78BQ5VT40 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
FAM78BQ5VT40 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
FAM78BQ5VT40 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC11.79□□□□□ -0.52
FAM78BQ5VT40 AC027612.4-201ENST00000605371 583 ntBASIC11.79□□□□□ -0.52
FAM78BQ5VT40 AC074044.1-201ENST00000609673 707 ntBASIC11.79□□□□□ -0.52
FAM78BQ5VT40 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC11.79□□□□□ -0.52
FAM78BQ5VT40 AL691403.2-201ENST00000618460 490 ntBASIC11.79□□□□□ -0.52
FAM78BQ5VT40 LINC00628-201ENST00000628516 1289 ntBASIC11.79□□□□□ -0.52
FAM78BQ5VT40 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
FAM78BQ5VT40 BAG2-201ENST00000370693 6651 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
FAM78BQ5VT40 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
FAM78BQ5VT40 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
FAM78BQ5VT40 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
FAM78BQ5VT40 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
FAM78BQ5VT40 COLGALT1-201ENST00000252599 3704 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
FAM78BQ5VT40 AL157414.3-201ENST00000624276 1954 ntBASIC11.79□□□□□ -0.52
FAM78BQ5VT40 AC016397.2-201ENST00000624848 1985 ntBASIC11.79□□□□□ -0.52
FAM78BQ5VT40 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC11.79□□□□□ -0.52
FAM78BQ5VT40 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
FAM78BQ5VT40 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC11.79□□□□□ -0.52
FAM78BQ5VT40 PAQR3-209ENST00000512733 9811 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
FAM78BQ5VT40 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
FAM78BQ5VT40 C6orf62-202ENST00000378119 4134 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
FAM78BQ5VT40 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC11.79□□□□□ -0.52
FAM78BQ5VT40 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC11.79□□□□□ -0.52
FAM78BQ5VT40 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC11.79□□□□□ -0.52
FAM78BQ5VT40 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
FAM78BQ5VT40 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
FAM78BQ5VT40 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC11.78□□□□□ -0.52
FAM78BQ5VT40 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC11.78□□□□□ -0.52
FAM78BQ5VT40 C15orf39-207ENST00000567617 4249 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
FAM78BQ5VT40 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
FAM78BQ5VT40 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
FAM78BQ5VT40 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
FAM78BQ5VT40 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
FAM78BQ5VT40 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
FAM78BQ5VT40 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
FAM78BQ5VT40 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC11.78□□□□□ -0.52
FAM78BQ5VT40 NFATC2-202ENST00000396009 7437 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
FAM78BQ5VT40 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
FAM78BQ5VT40 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
FAM78BQ5VT40 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
FAM78BQ5VT40 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
FAM78BQ5VT40 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
FAM78BQ5VT40 ARHGAP20-201ENST00000260283 6189 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
FAM78BQ5VT40 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC11.78□□□□□ -0.52
FAM78BQ5VT40 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC11.78□□□□□ -0.52
FAM78BQ5VT40 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC11.78□□□□□ -0.52
FAM78BQ5VT40 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
FAM78BQ5VT40 MYO7A-202ENST00000409709 7462 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
FAM78BQ5VT40 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
FAM78BQ5VT40 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
FAM78BQ5VT40 AHI1-201ENST00000265602 4335 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
FAM78BQ5VT40 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
FAM78BQ5VT40 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC11.78□□□□□ -0.52
FAM78BQ5VT40 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
FAM78BQ5VT40 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC11.78□□□□□ -0.52
FAM78BQ5VT40 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
FAM78BQ5VT40 AC004066.1-201ENST00000502488 802 ntBASIC11.78□□□□□ -0.52
FAM78BQ5VT40 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC11.78□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms