Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
PTPN20Q4JDL3 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
PTPN20Q4JDL3 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PTPN20Q4JDL3 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PTPN20Q4JDL3 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC15.46■□□□□ 0.07
PTPN20Q4JDL3 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PTPN20Q4JDL3 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PTPN20Q4JDL3 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
PTPN20Q4JDL3 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
PTPN20Q4JDL3 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
PTPN20Q4JDL3 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
PTPN20Q4JDL3 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
PTPN20Q4JDL3 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
PTPN20Q4JDL3 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PTPN20Q4JDL3 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PTPN20Q4JDL3 HNRNPA1P27-201ENST00000412087 955 ntBASIC15.46■□□□□ 0.07
PTPN20Q4JDL3 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC15.46■□□□□ 0.07
PTPN20Q4JDL3 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
PTPN20Q4JDL3 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
PTPN20Q4JDL3 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC15.46■□□□□ 0.07
PTPN20Q4JDL3 NOP2-220ENST00000545915 630 ntTSL 2 BASIC15.46■□□□□ 0.07
PTPN20Q4JDL3 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC15.46■□□□□ 0.07
PTPN20Q4JDL3 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PTPN20Q4JDL3 AC027237.1-201ENST00000560942 655 ntBASIC15.46■□□□□ 0.07
PTPN20Q4JDL3 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC15.46■□□□□ 0.07
PTPN20Q4JDL3 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC15.46■□□□□ 0.07
PTPN20Q4JDL3 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC15.46■□□□□ 0.07
PTPN20Q4JDL3 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PTPN20Q4JDL3 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
PTPN20Q4JDL3 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC15.46■□□□□ 0.07
PTPN20Q4JDL3 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC15.46■□□□□ 0.07
PTPN20Q4JDL3 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
PTPN20Q4JDL3 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
PTPN20Q4JDL3 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC15.46■□□□□ 0.07
PTPN20Q4JDL3 CICP16-201ENST00000502609 2813 ntBASIC15.46■□□□□ 0.07
PTPN20Q4JDL3 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC15.46■□□□□ 0.07
PTPN20Q4JDL3 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
PTPN20Q4JDL3 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.06
PTPN20Q4JDL3 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
PTPN20Q4JDL3 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC15.46■□□□□ 0.06
PTPN20Q4JDL3 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
PTPN20Q4JDL3 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
PTPN20Q4JDL3 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PTPN20Q4JDL3 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PTPN20Q4JDL3 OS9-204ENST00000389146 2091 ntTSL 2 BASIC15.45■□□□□ 0.06
PTPN20Q4JDL3 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
PTPN20Q4JDL3 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
PTPN20Q4JDL3 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
PTPN20Q4JDL3 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
PTPN20Q4JDL3 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
PTPN20Q4JDL3 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
PTPN20Q4JDL3 AC136759.1-202ENST00000530858 2194 ntBASIC15.45■□□□□ 0.06
PTPN20Q4JDL3 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
PTPN20Q4JDL3 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
PTPN20Q4JDL3 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
PTPN20Q4JDL3 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PTPN20Q4JDL3 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
PTPN20Q4JDL3 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PTPN20Q4JDL3 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PTPN20Q4JDL3 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
PTPN20Q4JDL3 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
PTPN20Q4JDL3 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC15.45■□□□□ 0.06
PTPN20Q4JDL3 AL645933.1-201ENST00000440087 609 ntBASIC15.45■□□□□ 0.06
PTPN20Q4JDL3 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC15.45■□□□□ 0.06
PTPN20Q4JDL3 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC15.45■□□□□ 0.06
PTPN20Q4JDL3 AC244157.2-201ENST00000616239 1006 ntBASIC15.45■□□□□ 0.06
PTPN20Q4JDL3 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC15.45■□□□□ 0.06
PTPN20Q4JDL3 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
PTPN20Q4JDL3 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC15.45■□□□□ 0.06
PTPN20Q4JDL3 AC020910.6-201ENST00000623084 1459 ntBASIC15.45■□□□□ 0.06
PTPN20Q4JDL3 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
PTPN20Q4JDL3 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PTPN20Q4JDL3 AC244394.1-201ENST00000435000 1665 ntBASIC15.44■□□□□ 0.06
PTPN20Q4JDL3 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC15.44■□□□□ 0.06
PTPN20Q4JDL3 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC15.44■□□□□ 0.06
PTPN20Q4JDL3 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC15.44■□□□□ 0.06
PTPN20Q4JDL3 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PTPN20Q4JDL3 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PTPN20Q4JDL3 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PTPN20Q4JDL3 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
PTPN20Q4JDL3 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
PTPN20Q4JDL3 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
PTPN20Q4JDL3 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
PTPN20Q4JDL3 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC15.44■□□□□ 0.06
PTPN20Q4JDL3 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
PTPN20Q4JDL3 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
PTPN20Q4JDL3 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PTPN20Q4JDL3 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC15.44■□□□□ 0.06
PTPN20Q4JDL3 TMBIM7P-202ENST00000641474 1516 ntBASIC15.44■□□□□ 0.06
PTPN20Q4JDL3 AC016397.2-201ENST00000624848 1985 ntBASIC15.44■□□□□ 0.06
PTPN20Q4JDL3 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC15.44■□□□□ 0.06
PTPN20Q4JDL3 AL928921.2-201ENST00000641325 2442 ntBASIC15.44■□□□□ 0.06
PTPN20Q4JDL3 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
PTPN20Q4JDL3 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC15.44■□□□□ 0.06
PTPN20Q4JDL3 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
PTPN20Q4JDL3 HPD-204ENST00000543163 1709 ntTSL 5 BASIC15.44■□□□□ 0.06
PTPN20Q4JDL3 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
PTPN20Q4JDL3 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PTPN20Q4JDL3 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PTPN20Q4JDL3 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 62.2 ms