Protein–RNA interactions for Protein: Q04656

ATP7A, Copper-transporting ATPase 1, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP7AQ04656 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ATP7AQ04656 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
ATP7AQ04656 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC21.1■□□□□ 0.97
ATP7AQ04656 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
ATP7AQ04656 CR382285.1-201ENST00000625012 1485 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
ATP7AQ04656 CD74-202ENST00000353334 1449 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
ATP7AQ04656 HIST1H2BK-201ENST00000356950 381 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
ATP7AQ04656 GALP-201ENST00000357330 938 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ATP7AQ04656 TRAPPC3-201ENST00000373159 590 ntTSL 3 BASIC21.1■□□□□ 0.97
ATP7AQ04656 KRTAP10-5-201ENST00000400372 1150 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
ATP7AQ04656 COLEC11-204ENST00000402794 1134 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
ATP7AQ04656 AC093609.1-201ENST00000434020 952 ntTSL 2 BASIC21.1■□□□□ 0.97
ATP7AQ04656 GALP-202ENST00000440823 889 ntTSL 5 BASIC21.1■□□□□ 0.97
ATP7AQ04656 CU639417.1-201ENST00000464664 460 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
ATP7AQ04656 SOX2-OT-209ENST00000485035 561 ntTSL 4 BASIC21.1■□□□□ 0.97
ATP7AQ04656 AC145422.1-201ENST00000541574 544 ntTSL 3 BASIC21.1■□□□□ 0.97
ATP7AQ04656 CR383656.13-201ENST00000550928 563 ntTSL 3 BASIC21.1■□□□□ 0.97
ATP7AQ04656 AL512310.10-201ENST00000555580 563 ntTSL 3 BASIC21.1■□□□□ 0.97
ATP7AQ04656 ZFP36-201ENST00000594045 690 ntTSL 3 BASIC21.1■□□□□ 0.97
ATP7AQ04656 SOX2-OT-222ENST00000595084 853 ntTSL 5 BASIC21.1■□□□□ 0.97
ATP7AQ04656 H2BFS-201ENST00000599962 460 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
ATP7AQ04656 SOX2-OT-232ENST00000600386 792 ntTSL 5 BASIC21.1■□□□□ 0.97
ATP7AQ04656 GGNBP1-204ENST00000613113 887 ntBASIC21.1■□□□□ 0.97
ATP7AQ04656 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC21.1■□□□□ 0.97
ATP7AQ04656 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ATP7AQ04656 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC21.1■□□□□ 0.97
ATP7AQ04656 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ATP7AQ04656 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC21.1■□□□□ 0.97
ATP7AQ04656 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
ATP7AQ04656 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ATP7AQ04656 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC21.1■□□□□ 0.97
ATP7AQ04656 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC21.1■□□□□ 0.97
ATP7AQ04656 VDAC2-202ENST00000313132 1467 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
ATP7AQ04656 DUT-208ENST00000559540 1441 ntTSL 2 BASIC21.1■□□□□ 0.97
ATP7AQ04656 KLK4-201ENST00000324041 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ATP7AQ04656 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ATP7AQ04656 MC3R-201ENST00000243911 1084 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
ATP7AQ04656 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ATP7AQ04656 MORN2-201ENST00000340556 741 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ATP7AQ04656 AC099567.1-201ENST00000414418 931 ntTSL 5 BASIC21.09■□□□□ 0.97
ATP7AQ04656 PGAM1P11-201ENST00000416729 680 ntBASIC21.09■□□□□ 0.97
ATP7AQ04656 LINC01056-201ENST00000455711 1234 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
ATP7AQ04656 FAM3D-AS1-201ENST00000464125 821 ntTSL 3 BASIC21.09■□□□□ 0.97
ATP7AQ04656 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC21.09■□□□□ 0.97
ATP7AQ04656 HNRNPA1P5-201ENST00000558213 966 ntBASIC21.09■□□□□ 0.97
ATP7AQ04656 LINC02252-201ENST00000565706 487 ntTSL 3 BASIC21.09■□□□□ 0.97
ATP7AQ04656 AL049840.2-201ENST00000602722 535 ntBASIC21.09■□□□□ 0.97
ATP7AQ04656 MIAT_exon5_3.1-201ENST00000613656 377 ntBASIC21.09■□□□□ 0.97
ATP7AQ04656 AC106774.7-201ENST00000638408 597 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
ATP7AQ04656 AC106774.6-201ENST00000638483 597 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
ATP7AQ04656 AC233724.20-201ENST00000638842 597 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
ATP7AQ04656 AC233724.19-201ENST00000639969 597 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
ATP7AQ04656 AC106774.5-201ENST00000640558 597 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
ATP7AQ04656 AC233724.18-201ENST00000640803 597 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
ATP7AQ04656 AC233724.21-201ENST00000640846 597 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
ATP7AQ04656 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
ATP7AQ04656 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ATP7AQ04656 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
ATP7AQ04656 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
ATP7AQ04656 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ATP7AQ04656 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ATP7AQ04656 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
ATP7AQ04656 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC21.09■□□□□ 0.97
ATP7AQ04656 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
ATP7AQ04656 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ATP7AQ04656 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
ATP7AQ04656 B3GNTL1-201ENST00000320865 1383 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ATP7AQ04656 WIPI1-201ENST00000262139 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ATP7AQ04656 HIST1H2BF-201ENST00000356530 1196 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
ATP7AQ04656 TEX33-201ENST00000381821 978 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
ATP7AQ04656 OR2W2P-201ENST00000406313 909 ntBASIC21.09■□□□□ 0.97
ATP7AQ04656 AL121983.2-202ENST00000419983 535 ntTSL 3 BASIC21.09■□□□□ 0.97
ATP7AQ04656 OST4-201ENST00000429985 559 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
ATP7AQ04656 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC21.09■□□□□ 0.97
ATP7AQ04656 AL512310.5-201ENST00000551999 515 ntBASIC21.09■□□□□ 0.97
ATP7AQ04656 ATF7-212ENST00000591397 860 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
ATP7AQ04656 PTOV1-AS2-203ENST00000601893 719 ntTSL 4 BASIC21.09■□□□□ 0.97
ATP7AQ04656 PNPT1-207ENST00000625249 216 ntTSL 5 BASIC21.09■□□□□ 0.97
ATP7AQ04656 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
ATP7AQ04656 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
ATP7AQ04656 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
ATP7AQ04656 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
ATP7AQ04656 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
ATP7AQ04656 PGD-201ENST00000270776 1885 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
ATP7AQ04656 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
ATP7AQ04656 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
ATP7AQ04656 EZH2-202ENST00000350995 2477 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.96
ATP7AQ04656 SSR4-202ENST00000370085 526 ntTSL 2 BASIC21.08■□□□□ 0.96
ATP7AQ04656 AP000354.1-201ENST00000396982 456 ntBASIC21.08■□□□□ 0.96
ATP7AQ04656 AP000244.1-201ENST00000424582 201 ntBASIC21.08■□□□□ 0.96
ATP7AQ04656 AC104961.1-201ENST00000427605 771 ntBASIC21.08■□□□□ 0.96
ATP7AQ04656 ZNF877P-201ENST00000437614 612 ntBASIC21.08■□□□□ 0.96
ATP7AQ04656 AL365500.1-201ENST00000442783 868 ntTSL 3 BASIC21.08■□□□□ 0.96
ATP7AQ04656 FOXP4-AS1-205ENST00000454812 575 ntTSL 2 BASIC21.08■□□□□ 0.96
ATP7AQ04656 EXTL3-AS1-203ENST00000520023 780 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
ATP7AQ04656 RPAIN-205ENST00000536255 1057 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
ATP7AQ04656 AL359219.1-201ENST00000556311 934 ntBASIC21.08■□□□□ 0.96
ATP7AQ04656 AL590235.1-201ENST00000564650 861 ntBASIC21.08■□□□□ 0.96
ATP7AQ04656 ZNF737-204ENST00000596797 569 ntTSL 4 BASIC21.08■□□□□ 0.96
ATP7AQ04656 AC006547.3-201ENST00000600090 583 ntTSL 3 BASIC21.08■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms