Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC14.42□□□□□ -0.1
CDK3Q00526 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC14.42□□□□□ -0.1
CDK3Q00526 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC14.42□□□□□ -0.1
CDK3Q00526 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC14.42□□□□□ -0.1
CDK3Q00526 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC14.42□□□□□ -0.1
CDK3Q00526 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
CDK3Q00526 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CDK3Q00526 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CDK3Q00526 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC14.42□□□□□ -0.1
CDK3Q00526 AP001505.2-201ENST00000616815 443 ntBASIC14.42□□□□□ -0.1
CDK3Q00526 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
CDK3Q00526 DDX5-235ENST00000630471 473 ntTSL 4 BASIC14.42□□□□□ -0.1
CDK3Q00526 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC14.42□□□□□ -0.1
CDK3Q00526 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CDK3Q00526 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CDK3Q00526 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
CDK3Q00526 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CDK3Q00526 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC14.42□□□□□ -0.1
CDK3Q00526 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CDK3Q00526 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CDK3Q00526 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
CDK3Q00526 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
CDK3Q00526 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CDK3Q00526 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
CDK3Q00526 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CDK3Q00526 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC14.42□□□□□ -0.1
CDK3Q00526 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC14.42□□□□□ -0.1
CDK3Q00526 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC14.42□□□□□ -0.1
CDK3Q00526 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
CDK3Q00526 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CDK3Q00526 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CDK3Q00526 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CDK3Q00526 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CDK3Q00526 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CDK3Q00526 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CDK3Q00526 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
CDK3Q00526 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC14.41□□□□□ -0.1
CDK3Q00526 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CDK3Q00526 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CDK3Q00526 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CDK3Q00526 AC018629.1-201ENST00000623381 1736 ntBASIC14.41□□□□□ -0.1
CDK3Q00526 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CDK3Q00526 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC14.41□□□□□ -0.1
CDK3Q00526 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
CDK3Q00526 AL513477.1-201ENST00000602865 2407 ntBASIC14.41□□□□□ -0.1
CDK3Q00526 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
CDK3Q00526 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
CDK3Q00526 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CDK3Q00526 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
CDK3Q00526 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CDK3Q00526 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CDK3Q00526 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC14.41□□□□□ -0.1
CDK3Q00526 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
CDK3Q00526 XBP1P1-201ENST00000436573 652 ntBASIC14.41□□□□□ -0.1
CDK3Q00526 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC14.41□□□□□ -0.1
CDK3Q00526 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
CDK3Q00526 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC14.41□□□□□ -0.1
CDK3Q00526 RERG-205ENST00000537647 935 ntTSL 2 BASIC14.41□□□□□ -0.1
CDK3Q00526 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC14.41□□□□□ -0.1
CDK3Q00526 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC14.41□□□□□ -0.1
CDK3Q00526 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC14.41□□□□□ -0.1
CDK3Q00526 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CDK3Q00526 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC14.41□□□□□ -0.1
CDK3Q00526 NAP1L6-202ENST00000641404 1222 ntBASIC14.41□□□□□ -0.1
CDK3Q00526 AC138627.1-207ENST00000641560 1006 ntBASIC14.41□□□□□ -0.1
CDK3Q00526 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
CDK3Q00526 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC14.41□□□□□ -0.1
CDK3Q00526 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC14.41□□□□□ -0.1
CDK3Q00526 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC14.41□□□□□ -0.1
CDK3Q00526 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC14.41□□□□□ -0.1
CDK3Q00526 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC14.41□□□□□ -0.1
CDK3Q00526 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CDK3Q00526 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CDK3Q00526 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
CDK3Q00526 MYO15B-237ENST00000642007 4893 ntBASIC14.41□□□□□ -0.1
CDK3Q00526 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CDK3Q00526 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC14.41□□□□□ -0.1
CDK3Q00526 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC14.41□□□□□ -0.1
CDK3Q00526 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC14.41□□□□□ -0.1
CDK3Q00526 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CDK3Q00526 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CDK3Q00526 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC14.4□□□□□ -0.1
CDK3Q00526 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
CDK3Q00526 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC14.4□□□□□ -0.1
CDK3Q00526 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC14.4□□□□□ -0.1
CDK3Q00526 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC14.4□□□□□ -0.1
CDK3Q00526 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CDK3Q00526 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
CDK3Q00526 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CDK3Q00526 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CDK3Q00526 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC14.4□□□□□ -0.1
CDK3Q00526 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CDK3Q00526 RAN-210ENST00000541630 1475 ntTSL 2 BASIC14.4□□□□□ -0.1
CDK3Q00526 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CDK3Q00526 AC008132.1-202ENST00000342005 1389 ntBASIC14.4□□□□□ -0.1
CDK3Q00526 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC14.4□□□□□ -0.1
CDK3Q00526 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CDK3Q00526 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CDK3Q00526 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CDK3Q00526 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms