Protein–RNA interactions for Protein: P62306

SNRPF, Small nuclear ribonucleoprotein F, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPFP62306 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC15.92■□□□□ 0.14
SNRPFP62306 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
SNRPFP62306 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC15.92■□□□□ 0.14
SNRPFP62306 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SNRPFP62306 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
SNRPFP62306 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC15.92■□□□□ 0.14
SNRPFP62306 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC15.92■□□□□ 0.14
SNRPFP62306 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SNRPFP62306 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
SNRPFP62306 OS9-204ENST00000389146 2091 ntTSL 2 BASIC15.91■□□□□ 0.14
SNRPFP62306 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
SNRPFP62306 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
SNRPFP62306 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
SNRPFP62306 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
SNRPFP62306 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SNRPFP62306 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
SNRPFP62306 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SNRPFP62306 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SNRPFP62306 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC15.91■□□□□ 0.14
SNRPFP62306 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SNRPFP62306 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC15.91■□□□□ 0.14
SNRPFP62306 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
SNRPFP62306 SMS-201ENST00000379404 1174 ntTSL 3 BASIC15.91■□□□□ 0.14
SNRPFP62306 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
SNRPFP62306 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC15.91■□□□□ 0.14
SNRPFP62306 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC15.91■□□□□ 0.14
SNRPFP62306 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC15.91■□□□□ 0.14
SNRPFP62306 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC15.91■□□□□ 0.14
SNRPFP62306 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC15.91■□□□□ 0.14
SNRPFP62306 AC021016.3-201ENST00000608367 477 ntBASIC15.91■□□□□ 0.14
SNRPFP62306 AL096828.3-201ENST00000615354 462 ntBASIC15.91■□□□□ 0.14
SNRPFP62306 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC15.91■□□□□ 0.14
SNRPFP62306 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC15.91■□□□□ 0.14
SNRPFP62306 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
SNRPFP62306 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
SNRPFP62306 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
SNRPFP62306 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
SNRPFP62306 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SNRPFP62306 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
SNRPFP62306 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SNRPFP62306 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SNRPFP62306 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SNRPFP62306 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SNRPFP62306 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SNRPFP62306 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC15.91■□□□□ 0.14
SNRPFP62306 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC15.91■□□□□ 0.14
SNRPFP62306 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC15.91■□□□□ 0.14
SNRPFP62306 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC15.91■□□□□ 0.14
SNRPFP62306 AHCYP4-201ENST00000419201 1315 ntBASIC15.91■□□□□ 0.14
SNRPFP62306 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SNRPFP62306 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SNRPFP62306 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SNRPFP62306 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
SNRPFP62306 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC15.91■□□□□ 0.14
SNRPFP62306 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC15.91■□□□□ 0.14
SNRPFP62306 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SNRPFP62306 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
SNRPFP62306 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
SNRPFP62306 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC15.9■□□□□ 0.14
SNRPFP62306 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
SNRPFP62306 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SNRPFP62306 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SNRPFP62306 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
SNRPFP62306 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
SNRPFP62306 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
SNRPFP62306 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SNRPFP62306 HNRNPA1P63-201ENST00000427917 963 ntBASIC15.9■□□□□ 0.14
SNRPFP62306 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC15.9■□□□□ 0.14
SNRPFP62306 AC021723.1-201ENST00000486306 515 ntBASIC15.9■□□□□ 0.14
SNRPFP62306 AC006122.1-201ENST00000493323 440 ntBASIC15.9■□□□□ 0.14
SNRPFP62306 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC15.9■□□□□ 0.14
SNRPFP62306 CD74-212ENST00000524315 584 ntTSL 5 BASIC15.9■□□□□ 0.14
SNRPFP62306 AC003686.1-201ENST00000550956 1034 ntBASIC15.9■□□□□ 0.14
SNRPFP62306 DERL2-202ENST00000570848 657 ntTSL 5 BASIC15.9■□□□□ 0.14
SNRPFP62306 KLK3-207ENST00000595952 969 ntTSL 3 BASIC15.9■□□□□ 0.14
SNRPFP62306 BNIP3P13-201ENST00000599968 566 ntBASIC15.9■□□□□ 0.14
SNRPFP62306 MIR6752-201ENST00000618442 71 ntBASIC15.9■□□□□ 0.14
SNRPFP62306 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
SNRPFP62306 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SNRPFP62306 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC15.9■□□□□ 0.14
SNRPFP62306 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SNRPFP62306 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SNRPFP62306 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SNRPFP62306 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SNRPFP62306 TUBB8P4-201ENST00000511806 1324 ntBASIC15.9■□□□□ 0.14
SNRPFP62306 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
SNRPFP62306 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SNRPFP62306 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
SNRPFP62306 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
SNRPFP62306 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
SNRPFP62306 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
SNRPFP62306 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SNRPFP62306 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
SNRPFP62306 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC15.89■□□□□ 0.14
SNRPFP62306 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC15.89■□□□□ 0.13
SNRPFP62306 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SNRPFP62306 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
SNRPFP62306 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC15.89■□□□□ 0.13
SNRPFP62306 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC15.89■□□□□ 0.13
SNRPFP62306 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms