Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
APOC4P55056 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC10.79□□□□□ -0.68
APOC4P55056 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
APOC4P55056 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
APOC4P55056 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
APOC4P55056 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
APOC4P55056 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC10.79□□□□□ -0.68
APOC4P55056 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
APOC4P55056 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
APOC4P55056 CRCP-204ENST00000398684 492 ntTSL 2 BASIC10.79□□□□□ -0.68
APOC4P55056 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC10.79□□□□□ -0.68
APOC4P55056 NKAIN1P1-201ENST00000435754 582 ntBASIC10.79□□□□□ -0.68
APOC4P55056 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC10.79□□□□□ -0.68
APOC4P55056 AL133466.1-201ENST00000447582 150 ntBASIC10.79□□□□□ -0.68
APOC4P55056 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC10.79□□□□□ -0.68
APOC4P55056 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
APOC4P55056 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
APOC4P55056 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC10.79□□□□□ -0.68
APOC4P55056 AC090857.1-201ENST00000527400 390 ntBASIC10.79□□□□□ -0.68
APOC4P55056 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC10.79□□□□□ -0.68
APOC4P55056 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
APOC4P55056 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC10.79□□□□□ -0.68
APOC4P55056 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
APOC4P55056 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC10.79□□□□□ -0.68
APOC4P55056 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC10.79□□□□□ -0.68
APOC4P55056 AL805961.1-203ENST00000641078 1258 ntBASIC10.79□□□□□ -0.68
APOC4P55056 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
APOC4P55056 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC10.79□□□□□ -0.68
APOC4P55056 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
APOC4P55056 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
APOC4P55056 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
APOC4P55056 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
APOC4P55056 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
APOC4P55056 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
APOC4P55056 PEAR1-202ENST00000338302 4970 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
APOC4P55056 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
APOC4P55056 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC10.79□□□□□ -0.68
APOC4P55056 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
APOC4P55056 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC10.79□□□□□ -0.68
APOC4P55056 STRCP1-201ENST00000509801 5328 ntBASIC10.79□□□□□ -0.68
APOC4P55056 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
APOC4P55056 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
APOC4P55056 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC10.79□□□□□ -0.68
APOC4P55056 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
APOC4P55056 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC10.79□□□□□ -0.68
APOC4P55056 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
APOC4P55056 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC10.78□□□□□ -0.68
APOC4P55056 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
APOC4P55056 NCOR2-201ENST00000356219 7226 ntTSL 5 BASIC10.78□□□□□ -0.68
APOC4P55056 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
APOC4P55056 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC10.78□□□□□ -0.68
APOC4P55056 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC10.78□□□□□ -0.68
APOC4P55056 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC10.78□□□□□ -0.68
APOC4P55056 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
APOC4P55056 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC10.78□□□□□ -0.68
APOC4P55056 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
APOC4P55056 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
APOC4P55056 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC10.78□□□□□ -0.68
APOC4P55056 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC10.78□□□□□ -0.68
APOC4P55056 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
APOC4P55056 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC10.78□□□□□ -0.68
APOC4P55056 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
APOC4P55056 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
APOC4P55056 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
APOC4P55056 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC10.78□□□□□ -0.68
APOC4P55056 KIAA1217-209ENST00000430453 5962 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
APOC4P55056 KIAA1217-211ENST00000458595 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
APOC4P55056 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
APOC4P55056 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC10.78□□□□□ -0.68
APOC4P55056 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC10.78□□□□□ -0.68
APOC4P55056 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
APOC4P55056 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
APOC4P55056 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
APOC4P55056 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC10.78□□□□□ -0.68
APOC4P55056 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC10.78□□□□□ -0.68
APOC4P55056 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
APOC4P55056 AL662890.1-201ENST00000396818 632 ntBASIC10.78□□□□□ -0.68
APOC4P55056 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC10.78□□□□□ -0.68
APOC4P55056 AC005077.2-201ENST00000449786 690 ntBASIC10.78□□□□□ -0.68
APOC4P55056 RPL18P13-201ENST00000478088 569 ntBASIC10.78□□□□□ -0.68
APOC4P55056 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC10.78□□□□□ -0.68
APOC4P55056 MARK2P5-201ENST00000507649 634 ntBASIC10.78□□□□□ -0.68
APOC4P55056 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC10.78□□□□□ -0.68
APOC4P55056 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC10.78□□□□□ -0.68
APOC4P55056 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC10.78□□□□□ -0.68
APOC4P55056 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC10.78□□□□□ -0.68
APOC4P55056 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
APOC4P55056 AC026740.1-201ENST00000607068 791 ntBASIC10.78□□□□□ -0.68
APOC4P55056 AC022748.3-201ENST00000621828 275 ntBASIC10.78□□□□□ -0.68
APOC4P55056 AC068587.8-201ENST00000641239 219 ntBASIC10.78□□□□□ -0.68
APOC4P55056 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC10.78□□□□□ -0.68
APOC4P55056 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
APOC4P55056 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
APOC4P55056 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
APOC4P55056 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
APOC4P55056 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
APOC4P55056 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
APOC4P55056 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
APOC4P55056 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
APOC4P55056 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms