Protein–RNA interactions for Protein: P49454

CENPF, Centromere protein F, humanhuman

Predictions only

Length 3,210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPFP49454 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CENPFP49454 GPN3-203ENST00000543199 1604 ntTSL 5 BASIC16.12■□□□□ 0.17
CENPFP49454 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CENPFP49454 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CENPFP49454 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC16.12■□□□□ 0.17
CENPFP49454 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC16.12■□□□□ 0.17
CENPFP49454 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CENPFP49454 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CENPFP49454 ARL1-202ENST00000536227 1322 ntTSL 2 BASIC16.12■□□□□ 0.17
CENPFP49454 TMEM95-201ENST00000330767 1169 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
CENPFP49454 KCNK18-201ENST00000334549 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CENPFP49454 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
CENPFP49454 PRR23A-201ENST00000383163 801 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
CENPFP49454 RANGRF-202ENST00000407006 1074 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CENPFP49454 AC018814.1-201ENST00000418972 357 ntTSL 3 BASIC16.12■□□□□ 0.17
CENPFP49454 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC16.12■□□□□ 0.17
CENPFP49454 AC107464.2-201ENST00000502923 569 ntTSL 2 BASIC16.12■□□□□ 0.17
CENPFP49454 AL162231.1-205ENST00000544078 338 ntAPPRIS P2 TSL 2 BASIC16.12■□□□□ 0.17
CENPFP49454 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CENPFP49454 CLUL1-202ENST00000400606 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CENPFP49454 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
CENPFP49454 CASK-202ENST00000378158 3848 ntTSL 5 BASIC16.12■□□□□ 0.17
CENPFP49454 GOLGA8K-202ENST00000512626 1894 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
CENPFP49454 GOLGA8T-202ENST00000569052 1896 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
CENPFP49454 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CENPFP49454 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC16.12■□□□□ 0.17
CENPFP49454 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC16.11■□□□□ 0.17
CENPFP49454 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CENPFP49454 TMEM14B-208ENST00000467317 1224 ntTSL 2 BASIC16.11■□□□□ 0.17
CENPFP49454 PAX5-210ENST00000520281 969 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CENPFP49454 LY6E-215ENST00000523847 427 ntTSL 3 BASIC16.11■□□□□ 0.17
CENPFP49454 PRR13-209ENST00000549924 625 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
CENPFP49454 DLK1-205ENST00000556051 469 ntTSL 2 BASIC16.11■□□□□ 0.17
CENPFP49454 HAMP-203ENST00000598398 652 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
CENPFP49454 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CENPFP49454 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CENPFP49454 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC16.11■□□□□ 0.17
CENPFP49454 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CENPFP49454 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CENPFP49454 CICP6-201ENST00000457191 2729 ntBASIC16.11■□□□□ 0.17
CENPFP49454 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CENPFP49454 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CENPFP49454 AC136604.1-202ENST00000425471 771 ntBASIC16.11■□□□□ 0.17
CENPFP49454 RPL18-205ENST00000549273 1036 ntTSL 2 BASIC16.11■□□□□ 0.17
CENPFP49454 SCGB1B2P-201ENST00000595013 612 ntTSL 2 BASIC16.11■□□□□ 0.17
CENPFP49454 LINC00244-201ENST00000625073 613 ntBASIC16.11■□□□□ 0.17
CENPFP49454 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC16.11■□□□□ 0.17
CENPFP49454 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC16.11■□□□□ 0.17
CENPFP49454 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CENPFP49454 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CENPFP49454 CCL5-201ENST00000603197 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CENPFP49454 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CENPFP49454 COQ4-201ENST00000300452 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CENPFP49454 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
CENPFP49454 CD300LG-203ENST00000377203 1060 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
CENPFP49454 KRTAP4-12-201ENST00000394014 1077 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
CENPFP49454 AC015691.1-201ENST00000394793 535 ntTSL 3 BASIC16.11■□□□□ 0.17
CENPFP49454 IQCF4-202ENST00000422896 745 ntTSL 2 BASIC16.11■□□□□ 0.17
CENPFP49454 HNRNPA1P5-201ENST00000558213 966 ntBASIC16.11■□□□□ 0.17
CENPFP49454 AC023825.2-201ENST00000562970 672 ntTSL 2 BASIC16.11■□□□□ 0.17
CENPFP49454 YWHAE-212ENST00000575977 540 ntTSL 2 BASIC16.11■□□□□ 0.17
CENPFP49454 ANKRD36C-208ENST00000619511 737 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CENPFP49454 LINC01588-216ENST00000623502 975 ntTSL 2 BASIC16.11■□□□□ 0.17
CENPFP49454 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CENPFP49454 KDF1-202ENST00000616918 1651 ntTSL 2 BASIC16.11■□□□□ 0.17
CENPFP49454 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
CENPFP49454 FCRL6-202ENST00000339348 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CENPFP49454 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC16.11■□□□□ 0.17
CENPFP49454 ERICH1-206ENST00000522706 1551 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
CENPFP49454 ZNF691-201ENST00000372502 1910 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
CENPFP49454 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CENPFP49454 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC16.1■□□□□ 0.17
CENPFP49454 HTD2-205ENST00000477305 1531 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
CENPFP49454 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
CENPFP49454 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CENPFP49454 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CENPFP49454 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC16.1■□□□□ 0.17
CENPFP49454 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
CENPFP49454 GGTLC4P-201ENST00000402176 664 ntBASIC16.1■□□□□ 0.17
CENPFP49454 CITED1-209ENST00000453707 998 ntAPPRIS ALT2 TSL 3 BASIC16.1■□□□□ 0.17
CENPFP49454 AC015795.2-201ENST00000512720 575 ntTSL 3 BASIC16.1■□□□□ 0.17
CENPFP49454 AC087203.1-201ENST00000532111 1181 ntBASIC16.1■□□□□ 0.17
CENPFP49454 AC078814.4-201ENST00000546650 327 ntBASIC16.1■□□□□ 0.17
CENPFP49454 LINC01490-202ENST00000551399 1260 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CENPFP49454 BMF-206ENST00000558774 671 ntTSL 3 BASIC16.1■□□□□ 0.17
CENPFP49454 RNF103-CHMP3-202ENST00000604011 1135 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
CENPFP49454 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CENPFP49454 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CENPFP49454 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CENPFP49454 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CENPFP49454 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
CENPFP49454 SARS-202ENST00000369923 1882 ntTSL 5 BASIC16.1■□□□□ 0.17
CENPFP49454 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC16.1■□□□□ 0.17
CENPFP49454 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CENPFP49454 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
CENPFP49454 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC16.1■□□□□ 0.17
CENPFP49454 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
CENPFP49454 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC16.1■□□□□ 0.17
CENPFP49454 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC16.1■□□□□ 0.17
CENPFP49454 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms