Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC18.37■□□□□ 0.53
COL15A1P39059 LINC00969-257ENST00000625632 898 ntTSL 5 BASIC18.37■□□□□ 0.53
COL15A1P39059 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
COL15A1P39059 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
COL15A1P39059 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC18.37■□□□□ 0.53
COL15A1P39059 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC18.37■□□□□ 0.53
COL15A1P39059 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
COL15A1P39059 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC18.37■□□□□ 0.53
COL15A1P39059 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
COL15A1P39059 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
COL15A1P39059 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
COL15A1P39059 SLC44A3-209ENST00000532427 1912 ntTSL 2 BASIC18.36■□□□□ 0.53
COL15A1P39059 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
COL15A1P39059 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
COL15A1P39059 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC18.36■□□□□ 0.53
COL15A1P39059 API5-208ENST00000531273 1868 ntTSL 2 BASIC18.36■□□□□ 0.53
COL15A1P39059 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
COL15A1P39059 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
COL15A1P39059 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
COL15A1P39059 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
COL15A1P39059 BGLAP-201ENST00000368272 732 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
COL15A1P39059 NDUFS7-203ENST00000414651 841 ntTSL 5 BASIC18.36■□□□□ 0.53
COL15A1P39059 LINC01433-201ENST00000419003 697 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
COL15A1P39059 OR8T1P-201ENST00000421347 918 ntBASIC18.36■□□□□ 0.53
COL15A1P39059 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
COL15A1P39059 ERP29P1-201ENST00000442902 706 ntBASIC18.36■□□□□ 0.53
COL15A1P39059 ALG1L13P-202ENST00000519320 584 ntBASIC18.36■□□□□ 0.53
COL15A1P39059 ORAOV1-209ENST00000538554 1000 ntTSL 2 BASIC18.36■□□□□ 0.53
COL15A1P39059 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC18.36■□□□□ 0.53
COL15A1P39059 AC023824.1-201ENST00000562945 2975 ntBASIC18.36■□□□□ 0.53
COL15A1P39059 AC007952.4-201ENST00000573866 637 ntBASIC18.36■□□□□ 0.53
COL15A1P39059 MIR2392-201ENST00000584881 84 ntBASIC18.36■□□□□ 0.53
COL15A1P39059 AP000322.3-201ENST00000608665 388 ntBASIC18.36■□□□□ 0.53
COL15A1P39059 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
COL15A1P39059 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
COL15A1P39059 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC18.36■□□□□ 0.53
COL15A1P39059 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
COL15A1P39059 RASSF6-202ENST00000335049 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
COL15A1P39059 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
COL15A1P39059 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC18.36■□□□□ 0.53
COL15A1P39059 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
COL15A1P39059 CICP24-201ENST00000605464 2705 ntBASIC18.36■□□□□ 0.53
COL15A1P39059 MYB-242ENST00000618728 3545 ntTSL 5 BASIC18.36■□□□□ 0.53
COL15A1P39059 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
COL15A1P39059 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
COL15A1P39059 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
COL15A1P39059 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC18.35■□□□□ 0.53
COL15A1P39059 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC18.35■□□□□ 0.53
COL15A1P39059 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
COL15A1P39059 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
COL15A1P39059 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
COL15A1P39059 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC18.35■□□□□ 0.53
COL15A1P39059 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
COL15A1P39059 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
COL15A1P39059 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
COL15A1P39059 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
COL15A1P39059 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
COL15A1P39059 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC18.35■□□□□ 0.53
COL15A1P39059 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC18.35■□□□□ 0.53
COL15A1P39059 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
COL15A1P39059 CST1-201ENST00000304749 760 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
COL15A1P39059 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
COL15A1P39059 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
COL15A1P39059 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
COL15A1P39059 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC18.35■□□□□ 0.53
COL15A1P39059 MIR503HG-202ENST00000440570 760 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
COL15A1P39059 RPL18AP8-201ENST00000486071 528 ntBASIC18.35■□□□□ 0.53
COL15A1P39059 REEP5-205ENST00000504247 480 ntTSL 5 BASIC18.35■□□□□ 0.53
COL15A1P39059 REEP5-207ENST00000513339 1139 ntTSL 2 BASIC18.35■□□□□ 0.53
COL15A1P39059 LINC01481-204ENST00000550216 494 ntTSL 2 BASIC18.35■□□□□ 0.53
COL15A1P39059 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC18.35■□□□□ 0.53
COL15A1P39059 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC18.35■□□□□ 0.53
COL15A1P39059 ELP5-212ENST00000574255 671 ntTSL 2 BASIC18.35■□□□□ 0.53
COL15A1P39059 ZNF530-203ENST00000597864 634 ntTSL 2 BASIC18.35■□□□□ 0.53
COL15A1P39059 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC18.35■□□□□ 0.53
COL15A1P39059 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC18.35■□□□□ 0.53
COL15A1P39059 LINC00431-202ENST00000636375 159 ntBASIC18.35■□□□□ 0.53
COL15A1P39059 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
COL15A1P39059 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
COL15A1P39059 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
COL15A1P39059 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
COL15A1P39059 PRPF18-202ENST00000378572 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
COL15A1P39059 AC018529.2-202ENST00000611482 3087 ntBASIC18.35■□□□□ 0.53
COL15A1P39059 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
COL15A1P39059 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
COL15A1P39059 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
COL15A1P39059 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
COL15A1P39059 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
COL15A1P39059 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
COL15A1P39059 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
COL15A1P39059 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
COL15A1P39059 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
COL15A1P39059 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
COL15A1P39059 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC18.34■□□□□ 0.53
COL15A1P39059 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
COL15A1P39059 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
COL15A1P39059 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC18.34■□□□□ 0.53
COL15A1P39059 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
COL15A1P39059 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
COL15A1P39059 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms