Protein–RNA interactions for Protein: P10827

THRA, Thyroid hormone receptor alpha, humanhuman

Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THRAP10827 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
THRAP10827 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
THRAP10827 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
THRAP10827 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
THRAP10827 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
THRAP10827 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
THRAP10827 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
THRAP10827 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
THRAP10827 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC14.87□□□□□ -0.03
THRAP10827 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
THRAP10827 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
THRAP10827 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC14.87□□□□□ -0.03
THRAP10827 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
THRAP10827 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC14.87□□□□□ -0.03
THRAP10827 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
THRAP10827 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
THRAP10827 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC14.87□□□□□ -0.03
THRAP10827 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC14.87□□□□□ -0.03
THRAP10827 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
THRAP10827 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
THRAP10827 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC14.87□□□□□ -0.03
THRAP10827 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
THRAP10827 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
THRAP10827 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
THRAP10827 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
THRAP10827 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
THRAP10827 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC14.87□□□□□ -0.03
THRAP10827 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
THRAP10827 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
THRAP10827 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
THRAP10827 KRT18P25-201ENST00000508931 1278 ntBASIC14.87□□□□□ -0.03
THRAP10827 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC14.87□□□□□ -0.03
THRAP10827 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC14.87□□□□□ -0.03
THRAP10827 RN7SL219P-201ENST00000582872 296 ntBASIC14.87□□□□□ -0.03
THRAP10827 TBCB-211ENST00000589996 724 ntTSL 3 BASIC14.87□□□□□ -0.03
THRAP10827 LARP4-220ENST00000615080 856 ntTSL 5 BASIC14.87□□□□□ -0.03
THRAP10827 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC14.87□□□□□ -0.03
THRAP10827 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
THRAP10827 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
THRAP10827 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
THRAP10827 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
THRAP10827 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
THRAP10827 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC14.87□□□□□ -0.03
THRAP10827 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
THRAP10827 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC14.87□□□□□ -0.03
THRAP10827 PTENP1-202ENST00000532280 3996 ntBASIC14.87□□□□□ -0.03
THRAP10827 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
THRAP10827 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
THRAP10827 AL138799.1-201ENST00000448213 1675 ntBASIC14.87□□□□□ -0.03
THRAP10827 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
THRAP10827 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
THRAP10827 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
THRAP10827 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
THRAP10827 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
THRAP10827 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
THRAP10827 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC14.86□□□□□ -0.03
THRAP10827 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
THRAP10827 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC14.86□□□□□ -0.03
THRAP10827 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
THRAP10827 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
THRAP10827 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
THRAP10827 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
THRAP10827 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
THRAP10827 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC14.86□□□□□ -0.03
THRAP10827 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
THRAP10827 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
THRAP10827 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
THRAP10827 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
THRAP10827 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
THRAP10827 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
THRAP10827 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
THRAP10827 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
THRAP10827 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
THRAP10827 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
THRAP10827 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
THRAP10827 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC14.86□□□□□ -0.03
THRAP10827 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
THRAP10827 AC025279.2-201ENST00000569730 653 ntBASIC14.86□□□□□ -0.03
THRAP10827 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC14.86□□□□□ -0.03
THRAP10827 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC14.86□□□□□ -0.03
THRAP10827 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
THRAP10827 GPR39-203ENST00000622084 900 ntTSL 5 BASIC14.86□□□□□ -0.03
THRAP10827 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
THRAP10827 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
THRAP10827 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
THRAP10827 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
THRAP10827 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC14.86□□□□□ -0.03
THRAP10827 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
THRAP10827 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC14.86□□□□□ -0.03
THRAP10827 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
THRAP10827 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
THRAP10827 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
THRAP10827 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
THRAP10827 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
THRAP10827 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
THRAP10827 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
THRAP10827 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
THRAP10827 AC007787.1-201ENST00000588095 1583 ntBASIC14.85□□□□□ -0.03
THRAP10827 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
THRAP10827 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms