Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HLA-DRAP01903 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HLA-DRAP01903 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
HLA-DRAP01903 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC15.8■□□□□ 0.12
HLA-DRAP01903 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HLA-DRAP01903 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
HLA-DRAP01903 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HLA-DRAP01903 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
HLA-DRAP01903 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
HLA-DRAP01903 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
HLA-DRAP01903 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC15.8■□□□□ 0.12
HLA-DRAP01903 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC15.8■□□□□ 0.12
HLA-DRAP01903 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC15.8■□□□□ 0.12
HLA-DRAP01903 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
HLA-DRAP01903 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HLA-DRAP01903 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HLA-DRAP01903 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
HLA-DRAP01903 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC15.8■□□□□ 0.12
HLA-DRAP01903 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HLA-DRAP01903 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
HLA-DRAP01903 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC15.8■□□□□ 0.12
HLA-DRAP01903 RPS2P32-201ENST00000439199 892 ntBASIC15.8■□□□□ 0.12
HLA-DRAP01903 GOLGA2P4-201ENST00000441462 777 ntBASIC15.8■□□□□ 0.12
HLA-DRAP01903 KLF2P1-201ENST00000447438 1042 ntBASIC15.8■□□□□ 0.12
HLA-DRAP01903 HSPB1P2-201ENST00000448722 546 ntBASIC15.8■□□□□ 0.12
HLA-DRAP01903 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
HLA-DRAP01903 RIT1-205ENST00000539040 919 ntTSL 2 BASIC15.8■□□□□ 0.12
HLA-DRAP01903 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HLA-DRAP01903 AC027237.1-201ENST00000560942 655 ntBASIC15.8■□□□□ 0.12
HLA-DRAP01903 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC15.8■□□□□ 0.12
HLA-DRAP01903 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC15.8■□□□□ 0.12
HLA-DRAP01903 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC15.8■□□□□ 0.12
HLA-DRAP01903 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
HLA-DRAP01903 WARS-203ENST00000358655 2466 ntTSL 2 BASIC15.8■□□□□ 0.12
HLA-DRAP01903 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC15.8■□□□□ 0.12
HLA-DRAP01903 GOLGA8DP-202ENST00000341390 2184 ntBASIC15.8■□□□□ 0.12
HLA-DRAP01903 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HLA-DRAP01903 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC15.8■□□□□ 0.12
HLA-DRAP01903 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HLA-DRAP01903 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
HLA-DRAP01903 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC15.8■□□□□ 0.12
HLA-DRAP01903 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
HLA-DRAP01903 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC15.79■□□□□ 0.12
HLA-DRAP01903 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HLA-DRAP01903 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC15.79■□□□□ 0.12
HLA-DRAP01903 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC15.79■□□□□ 0.12
HLA-DRAP01903 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
HLA-DRAP01903 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
HLA-DRAP01903 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HLA-DRAP01903 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
HLA-DRAP01903 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
HLA-DRAP01903 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HLA-DRAP01903 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
HLA-DRAP01903 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
HLA-DRAP01903 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
HLA-DRAP01903 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HLA-DRAP01903 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
HLA-DRAP01903 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC15.79■□□□□ 0.12
HLA-DRAP01903 AL645933.1-201ENST00000440087 609 ntBASIC15.79■□□□□ 0.12
HLA-DRAP01903 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC15.79■□□□□ 0.12
HLA-DRAP01903 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC15.79■□□□□ 0.12
HLA-DRAP01903 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC15.79■□□□□ 0.12
HLA-DRAP01903 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC15.79■□□□□ 0.12
HLA-DRAP01903 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC15.79■□□□□ 0.12
HLA-DRAP01903 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC15.79■□□□□ 0.12
HLA-DRAP01903 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC15.79■□□□□ 0.12
HLA-DRAP01903 MIR6720-201ENST00000611664 98 ntBASIC15.79■□□□□ 0.12
HLA-DRAP01903 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC15.79■□□□□ 0.12
HLA-DRAP01903 AL162426.1-201ENST00000624141 743 ntBASIC15.79■□□□□ 0.12
HLA-DRAP01903 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC15.79■□□□□ 0.12
HLA-DRAP01903 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HLA-DRAP01903 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HLA-DRAP01903 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
HLA-DRAP01903 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC15.79■□□□□ 0.12
HLA-DRAP01903 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HLA-DRAP01903 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HLA-DRAP01903 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HLA-DRAP01903 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
HLA-DRAP01903 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HLA-DRAP01903 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC15.79■□□□□ 0.12
HLA-DRAP01903 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC15.79■□□□□ 0.12
HLA-DRAP01903 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HLA-DRAP01903 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
HLA-DRAP01903 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HLA-DRAP01903 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
HLA-DRAP01903 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC15.79■□□□□ 0.12
HLA-DRAP01903 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC15.79■□□□□ 0.12
HLA-DRAP01903 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
HLA-DRAP01903 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
HLA-DRAP01903 TMBIM7P-202ENST00000641474 1516 ntBASIC15.78■□□□□ 0.12
HLA-DRAP01903 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HLA-DRAP01903 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HLA-DRAP01903 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HLA-DRAP01903 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
HLA-DRAP01903 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC15.78■□□□□ 0.12
HLA-DRAP01903 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
HLA-DRAP01903 AC097376.2-205ENST00000610159 5334 ntBASIC15.78■□□□□ 0.12
HLA-DRAP01903 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
HLA-DRAP01903 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC15.78■□□□□ 0.12
HLA-DRAP01903 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms