Protein–RNA interactions for Protein: O95170

CDRT1, CMT1A duplicated region transcript 1 protein, humanhuman

Predictions only

Length 752 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1O95170 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
CDRT1O95170 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CDRT1O95170 POLD1-214ENST00000613923 3542 ntTSL 5 BASIC13.22□□□□□ -0.29
CDRT1O95170 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
CDRT1O95170 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CDRT1O95170 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC13.22□□□□□ -0.29
CDRT1O95170 METAP1D-201ENST00000315796 3419 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CDRT1O95170 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC13.22□□□□□ -0.29
CDRT1O95170 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CDRT1O95170 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
CDRT1O95170 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CDRT1O95170 NCOA7-203ENST00000392477 6457 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
CDRT1O95170 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
CDRT1O95170 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CDRT1O95170 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
CDRT1O95170 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC13.21□□□□□ -0.29
CDRT1O95170 CETN4P-206ENST00000642099 2168 ntBASIC13.21□□□□□ -0.29
CDRT1O95170 FHOD3-206ENST00000590592 4869 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
CDRT1O95170 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CDRT1O95170 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
CDRT1O95170 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC13.21□□□□□ -0.29
CDRT1O95170 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CDRT1O95170 TCF3-201ENST00000262965 4451 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
CDRT1O95170 PELP1-201ENST00000301396 3673 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
CDRT1O95170 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC13.21□□□□□ -0.29
CDRT1O95170 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC13.21□□□□□ -0.29
CDRT1O95170 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CDRT1O95170 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CDRT1O95170 RPP21-221ENST00000428040 594 ntTSL 2 BASIC13.21□□□□□ -0.29
CDRT1O95170 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC13.21□□□□□ -0.29
CDRT1O95170 AC023141.5-201ENST00000458585 616 ntBASIC13.21□□□□□ -0.29
CDRT1O95170 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC13.21□□□□□ -0.29
CDRT1O95170 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC13.21□□□□□ -0.29
CDRT1O95170 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC13.21□□□□□ -0.29
CDRT1O95170 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC13.21□□□□□ -0.29
CDRT1O95170 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CDRT1O95170 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC13.21□□□□□ -0.29
CDRT1O95170 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC13.21□□□□□ -0.29
CDRT1O95170 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
CDRT1O95170 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC13.21□□□□□ -0.29
CDRT1O95170 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC13.21□□□□□ -0.29
CDRT1O95170 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC13.21□□□□□ -0.29
CDRT1O95170 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC13.21□□□□□ -0.29
CDRT1O95170 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
CDRT1O95170 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CDRT1O95170 LINC00628-201ENST00000628516 1289 ntBASIC13.21□□□□□ -0.29
CDRT1O95170 AC090643.2-201ENST00000623442 2029 ntBASIC13.21□□□□□ -0.29
CDRT1O95170 ADCYAP1R1-207ENST00000614107 6575 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
CDRT1O95170 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
CDRT1O95170 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
CDRT1O95170 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
CDRT1O95170 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
CDRT1O95170 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
CDRT1O95170 AGAP10P-201ENST00000454844 2418 ntBASIC13.21□□□□□ -0.3
CDRT1O95170 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.3
CDRT1O95170 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC13.21□□□□□ -0.3
CDRT1O95170 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.3
CDRT1O95170 TP73-209ENST00000603362 1668 ntTSL 5 BASIC13.21□□□□□ -0.3
CDRT1O95170 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
CDRT1O95170 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.3
CDRT1O95170 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC13.21□□□□□ -0.3
CDRT1O95170 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
CDRT1O95170 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC13.21□□□□□ -0.3
CDRT1O95170 DAB2IP-202ENST00000309989 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
CDRT1O95170 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC13.21□□□□□ -0.3
CDRT1O95170 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC13.21□□□□□ -0.3
CDRT1O95170 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
CDRT1O95170 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC13.21□□□□□ -0.3
CDRT1O95170 Z97205.2-201ENST00000564697 1639 ntBASIC13.21□□□□□ -0.3
CDRT1O95170 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
CDRT1O95170 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CDRT1O95170 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CDRT1O95170 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CDRT1O95170 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CDRT1O95170 PLEKHG2-206ENST00000458508 3898 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
CDRT1O95170 SLC12A6-206ENST00000558589 3866 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CDRT1O95170 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CDRT1O95170 GSN-209ENST00000449733 2702 ntTSL 2 BASIC13.2□□□□□ -0.3
CDRT1O95170 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC13.2□□□□□ -0.3
CDRT1O95170 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CDRT1O95170 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
CDRT1O95170 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CDRT1O95170 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC13.2□□□□□ -0.3
CDRT1O95170 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CDRT1O95170 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CDRT1O95170 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CDRT1O95170 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CDRT1O95170 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
CDRT1O95170 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CDRT1O95170 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC13.2□□□□□ -0.3
CDRT1O95170 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC13.2□□□□□ -0.3
CDRT1O95170 AL080243.2-201ENST00000418783 582 ntBASIC13.2□□□□□ -0.3
CDRT1O95170 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CDRT1O95170 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CDRT1O95170 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC13.2□□□□□ -0.3
CDRT1O95170 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CDRT1O95170 AC112482.1-201ENST00000492080 688 ntBASIC13.2□□□□□ -0.3
CDRT1O95170 SATB1-217ENST00000493952 626 ntTSL 3 BASIC13.2□□□□□ -0.3
CDRT1O95170 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
CDRT1O95170 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC13.2□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms