Protein–RNA interactions for Protein: B2RPK0

HMGB1P1, Putative high mobility group protein B1-like 1, humanhuman

Predicted RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1B2RPK0 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC14.99□□□□□ -0.01
HMGB1P1B2RPK0 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC14.99□□□□□ -0.01
HMGB1P1B2RPK0 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC14.99□□□□□ -0.01
HMGB1P1B2RPK0 AC007967.2-201ENST00000432613 625 ntBASIC14.99□□□□□ -0.01
HMGB1P1B2RPK0 RNF146-204ENST00000476956 884 ntTSL 2 BASIC14.99□□□□□ -0.01
HMGB1P1B2RPK0 AC069335.1-201ENST00000489972 472 ntBASIC14.99□□□□□ -0.01
HMGB1P1B2RPK0 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC14.99□□□□□ -0.01
HMGB1P1B2RPK0 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC14.99□□□□□ -0.01
HMGB1P1B2RPK0 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HMGB1P1B2RPK0 CALM3-211ENST00000598871 561 ntTSL 4 BASIC14.99□□□□□ -0.01
HMGB1P1B2RPK0 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC14.99□□□□□ -0.01
HMGB1P1B2RPK0 LINC01115-203ENST00000606068 577 ntBASIC14.99□□□□□ -0.01
HMGB1P1B2RPK0 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC14.99□□□□□ -0.01
HMGB1P1B2RPK0 FIBCD1-204ENST00000448616 3119 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
HMGB1P1B2RPK0 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC14.99□□□□□ -0.01
HMGB1P1B2RPK0 PRDM10-202ENST00000358825 6322 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
HMGB1P1B2RPK0 PRDM10-203ENST00000360871 6301 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HMGB1P1B2RPK0 CRISPLD2-209ENST00000567845 2178 ntAPPRIS ALT1 TSL 5 BASIC14.99□□□□□ -0.01
HMGB1P1B2RPK0 TP73-201ENST00000346387 4854 ntTSL 5 BASIC14.99□□□□□ -0.01
HMGB1P1B2RPK0 TOMM40L-209ENST00000545897 2807 ntTSL 2 BASIC14.99□□□□□ -0.01
HMGB1P1B2RPK0 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
HMGB1P1B2RPK0 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HMGB1P1B2RPK0 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC14.99□□□□□ -0.01
HMGB1P1B2RPK0 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
HMGB1P1B2RPK0 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
HMGB1P1B2RPK0 YY1AP1-208ENST00000361831 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
HMGB1P1B2RPK0 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
HMGB1P1B2RPK0 AC015688.4-201ENST00000580780 1647 ntBASIC14.99□□□□□ -0.01
HMGB1P1B2RPK0 AL158070.2-201ENST00000623713 1621 ntBASIC14.99□□□□□ -0.01
HMGB1P1B2RPK0 COL6A2-203ENST00000397763 3101 ntTSL 5 BASIC14.99□□□□□ -0.01
HMGB1P1B2RPK0 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
HMGB1P1B2RPK0 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC14.99□□□□□ -0.01
HMGB1P1B2RPK0 SLC1A1-201ENST00000262352 3722 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HMGB1P1B2RPK0 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HMGB1P1B2RPK0 ACIN1-202ENST00000338631 2445 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
HMGB1P1B2RPK0 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC14.98□□□□□ -0.01
HMGB1P1B2RPK0 SRPRB-201ENST00000466490 2827 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
HMGB1P1B2RPK0 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
HMGB1P1B2RPK0 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC14.98□□□□□ -0.01
HMGB1P1B2RPK0 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC14.98□□□□□ -0.01
HMGB1P1B2RPK0 LINC00940-201ENST00000418006 2350 ntTSL 2 BASIC14.98□□□□□ -0.01
HMGB1P1B2RPK0 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC14.98□□□□□ -0.01
HMGB1P1B2RPK0 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HMGB1P1B2RPK0 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
HMGB1P1B2RPK0 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
HMGB1P1B2RPK0 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
HMGB1P1B2RPK0 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
HMGB1P1B2RPK0 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC14.98□□□□□ -0.01
HMGB1P1B2RPK0 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC14.98□□□□□ -0.01
HMGB1P1B2RPK0 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
HMGB1P1B2RPK0 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
HMGB1P1B2RPK0 CD99L2-205ENST00000437787 3493 ntTSL 2 BASIC14.98□□□□□ -0.01
HMGB1P1B2RPK0 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HMGB1P1B2RPK0 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC14.98□□□□□ -0.01
HMGB1P1B2RPK0 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC14.98□□□□□ -0.01
HMGB1P1B2RPK0 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HMGB1P1B2RPK0 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
HMGB1P1B2RPK0 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HMGB1P1B2RPK0 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC14.98□□□□□ -0.01
HMGB1P1B2RPK0 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
HMGB1P1B2RPK0 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
HMGB1P1B2RPK0 CMC4-201ENST00000369479 864 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
HMGB1P1B2RPK0 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HMGB1P1B2RPK0 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC14.98□□□□□ -0.01
HMGB1P1B2RPK0 GATB-205ENST00000508611 605 ntTSL 2 BASIC14.98□□□□□ -0.01
HMGB1P1B2RPK0 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC14.98□□□□□ -0.01
HMGB1P1B2RPK0 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
HMGB1P1B2RPK0 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC14.98□□□□□ -0.01
HMGB1P1B2RPK0 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC14.98□□□□□ -0.01
HMGB1P1B2RPK0 AC012313.10-201ENST00000623509 926 ntBASIC14.98□□□□□ -0.01
HMGB1P1B2RPK0 AC092865.6-201ENST00000642101 219 ntBASIC14.98□□□□□ -0.01
HMGB1P1B2RPK0 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
HMGB1P1B2RPK0 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC14.98□□□□□ -0.01
HMGB1P1B2RPK0 SLC45A1-201ENST00000289877 2401 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HMGB1P1B2RPK0 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC14.98□□□□□ -0.01
HMGB1P1B2RPK0 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HMGB1P1B2RPK0 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HMGB1P1B2RPK0 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HMGB1P1B2RPK0 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC14.98□□□□□ -0.01
HMGB1P1B2RPK0 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC14.98□□□□□ -0.01
HMGB1P1B2RPK0 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC14.98□□□□□ -0.01
HMGB1P1B2RPK0 AC009474.1-201ENST00000455096 1565 ntBASIC14.98□□□□□ -0.01
HMGB1P1B2RPK0 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC14.98□□□□□ -0.01
HMGB1P1B2RPK0 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HMGB1P1B2RPK0 AC093899.2-201ENST00000513963 1935 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
HMGB1P1B2RPK0 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC14.98□□□□□ -0.01
HMGB1P1B2RPK0 FNTB-201ENST00000246166 2834 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HMGB1P1B2RPK0 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC14.97□□□□□ -0.01
HMGB1P1B2RPK0 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
HMGB1P1B2RPK0 AGAP12P-201ENST00000585227 2359 ntBASIC14.97□□□□□ -0.01
HMGB1P1B2RPK0 KIAA0930-201ENST00000251993 2723 ntTSL 2 BASIC14.97□□□□□ -0.01
HMGB1P1B2RPK0 PTH2R-201ENST00000272847 2713 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HMGB1P1B2RPK0 C1QTNF1-203ENST00000354124 2714 ntAPPRIS P1 TSL 4 BASIC14.97□□□□□ -0.01
HMGB1P1B2RPK0 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
HMGB1P1B2RPK0 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
HMGB1P1B2RPK0 EPN2-205ENST00000395626 2863 ntTSL 2 BASIC14.97□□□□□ -0.01
HMGB1P1B2RPK0 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HMGB1P1B2RPK0 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
HMGB1P1B2RPK0 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
HMGB1P1B2RPK0 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms