Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC15.2■□□□□ 0.02
HCFC2Q9Y5Z7 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC15.2■□□□□ 0.02
HCFC2Q9Y5Z7 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HCFC2Q9Y5Z7 SPINT2-204ENST00000587090 1246 ntAPPRIS ALT2 TSL 3 BASIC15.2■□□□□ 0.02
HCFC2Q9Y5Z7 AC140113.1-201ENST00000603467 169 ntBASIC15.2■□□□□ 0.02
HCFC2Q9Y5Z7 AC007250.1-201ENST00000608934 338 ntBASIC15.2■□□□□ 0.02
HCFC2Q9Y5Z7 GLUD1P2-203ENST00000631118 486 ntTSL 3 BASIC15.2■□□□□ 0.02
HCFC2Q9Y5Z7 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
HCFC2Q9Y5Z7 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HCFC2Q9Y5Z7 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC15.2■□□□□ 0.02
HCFC2Q9Y5Z7 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC15.2■□□□□ 0.02
HCFC2Q9Y5Z7 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
HCFC2Q9Y5Z7 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC15.2■□□□□ 0.02
HCFC2Q9Y5Z7 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
HCFC2Q9Y5Z7 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HCFC2Q9Y5Z7 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
HCFC2Q9Y5Z7 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HCFC2Q9Y5Z7 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
HCFC2Q9Y5Z7 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
HCFC2Q9Y5Z7 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC15.2■□□□□ 0.02
HCFC2Q9Y5Z7 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
HCFC2Q9Y5Z7 SF1-209ENST00000433274 2317 ntTSL 2 BASIC15.2■□□□□ 0.02
HCFC2Q9Y5Z7 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HCFC2Q9Y5Z7 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
HCFC2Q9Y5Z7 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
HCFC2Q9Y5Z7 TEKT4P2-202ENST00000559466 1312 ntBASIC15.19■□□□□ 0.02
HCFC2Q9Y5Z7 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
HCFC2Q9Y5Z7 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HCFC2Q9Y5Z7 CDC45-202ENST00000404724 1693 ntTSL 2 BASIC15.19■□□□□ 0.02
HCFC2Q9Y5Z7 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC15.19■□□□□ 0.02
HCFC2Q9Y5Z7 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
HCFC2Q9Y5Z7 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HCFC2Q9Y5Z7 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HCFC2Q9Y5Z7 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC15.19■□□□□ 0.02
HCFC2Q9Y5Z7 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HCFC2Q9Y5Z7 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
HCFC2Q9Y5Z7 AC006372.4-201ENST00000624122 1543 ntBASIC15.19■□□□□ 0.02
HCFC2Q9Y5Z7 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC15.19■□□□□ 0.02
HCFC2Q9Y5Z7 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC15.19■□□□□ 0.02
HCFC2Q9Y5Z7 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
HCFC2Q9Y5Z7 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC15.19■□□□□ 0.02
HCFC2Q9Y5Z7 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC15.19■□□□□ 0.02
HCFC2Q9Y5Z7 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HCFC2Q9Y5Z7 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC15.19■□□□□ 0.02
HCFC2Q9Y5Z7 STK16-203ENST00000409516 895 ntTSL 2 BASIC15.19■□□□□ 0.02
HCFC2Q9Y5Z7 GCSHP3-201ENST00000431120 391 ntBASIC15.19■□□□□ 0.02
HCFC2Q9Y5Z7 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC15.19■□□□□ 0.02
HCFC2Q9Y5Z7 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC15.19■□□□□ 0.02
HCFC2Q9Y5Z7 RN7SL396P-201ENST00000471086 295 ntBASIC15.19■□□□□ 0.02
HCFC2Q9Y5Z7 C8orf31-207ENST00000524181 1199 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
HCFC2Q9Y5Z7 OR5BD1P-201ENST00000532527 817 ntBASIC15.19■□□□□ 0.02
HCFC2Q9Y5Z7 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC15.19■□□□□ 0.02
HCFC2Q9Y5Z7 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC15.19■□□□□ 0.02
HCFC2Q9Y5Z7 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
HCFC2Q9Y5Z7 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
HCFC2Q9Y5Z7 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
HCFC2Q9Y5Z7 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HCFC2Q9Y5Z7 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC15.19■□□□□ 0.02
HCFC2Q9Y5Z7 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC15.19■□□□□ 0.02
HCFC2Q9Y5Z7 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
HCFC2Q9Y5Z7 FTX-216ENST00000638985 1367 ntTSL 5 BASIC15.19■□□□□ 0.02
HCFC2Q9Y5Z7 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HCFC2Q9Y5Z7 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
HCFC2Q9Y5Z7 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
HCFC2Q9Y5Z7 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
HCFC2Q9Y5Z7 BRD7P5-201ENST00000299197 1822 ntBASIC15.19■□□□□ 0.02
HCFC2Q9Y5Z7 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HCFC2Q9Y5Z7 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
HCFC2Q9Y5Z7 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC15.19■□□□□ 0.02
HCFC2Q9Y5Z7 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
HCFC2Q9Y5Z7 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
HCFC2Q9Y5Z7 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
HCFC2Q9Y5Z7 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HCFC2Q9Y5Z7 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HCFC2Q9Y5Z7 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
HCFC2Q9Y5Z7 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
HCFC2Q9Y5Z7 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HCFC2Q9Y5Z7 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC15.19■□□□□ 0.02
HCFC2Q9Y5Z7 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
HCFC2Q9Y5Z7 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC15.18■□□□□ 0.02
HCFC2Q9Y5Z7 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
HCFC2Q9Y5Z7 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HCFC2Q9Y5Z7 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HCFC2Q9Y5Z7 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC15.18■□□□□ 0.02
HCFC2Q9Y5Z7 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
HCFC2Q9Y5Z7 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
HCFC2Q9Y5Z7 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HCFC2Q9Y5Z7 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC15.18■□□□□ 0.02
HCFC2Q9Y5Z7 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC15.18■□□□□ 0.02
HCFC2Q9Y5Z7 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
HCFC2Q9Y5Z7 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HCFC2Q9Y5Z7 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC15.18■□□□□ 0.02
HCFC2Q9Y5Z7 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
HCFC2Q9Y5Z7 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HCFC2Q9Y5Z7 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HCFC2Q9Y5Z7 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HCFC2Q9Y5Z7 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HCFC2Q9Y5Z7 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
HCFC2Q9Y5Z7 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
HCFC2Q9Y5Z7 CMTM5-202ENST00000342473 725 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms