Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 MCU-204ENST00000536019 3224 ntTSL 2 BASIC17.68■□□□□ 0.42
RTN4Q9NQC3 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC17.68■□□□□ 0.42
RTN4Q9NQC3 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC17.68■□□□□ 0.42
RTN4Q9NQC3 TMF1P1-201ENST00000576058 373 ntBASIC17.68■□□□□ 0.42
RTN4Q9NQC3 AC104564.6-201ENST00000582881 1052 ntBASIC17.68■□□□□ 0.42
RTN4Q9NQC3 PRKN-208ENST00000610470 531 ntTSL 2 BASIC17.68■□□□□ 0.42
RTN4Q9NQC3 PRKN-209ENST00000612485 225 ntTSL 5 BASIC17.68■□□□□ 0.42
RTN4Q9NQC3 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC17.68■□□□□ 0.42
RTN4Q9NQC3 TDRD9-202ENST00000409874 4782 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
RTN4Q9NQC3 COPS7B-201ENST00000350033 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RTN4Q9NQC3 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RTN4Q9NQC3 SAMD14-202ENST00000330175 4425 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RTN4Q9NQC3 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RTN4Q9NQC3 PLA2G6-202ENST00000335539 3060 ntTSL 5 BASIC17.68■□□□□ 0.42
RTN4Q9NQC3 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC17.68■□□□□ 0.42
RTN4Q9NQC3 AC134407.2-201ENST00000625089 1978 ntBASIC17.68■□□□□ 0.42
RTN4Q9NQC3 DNAJC14-202ENST00000317287 2774 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
RTN4Q9NQC3 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RTN4Q9NQC3 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
RTN4Q9NQC3 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RTN4Q9NQC3 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RTN4Q9NQC3 AC015818.8-201ENST00000587907 1519 ntBASIC17.67■□□□□ 0.42
RTN4Q9NQC3 AC012531.1-201ENST00000562848 2680 ntBASIC17.67■□□□□ 0.42
RTN4Q9NQC3 PID1-204ENST00000409462 2387 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RTN4Q9NQC3 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
RTN4Q9NQC3 BX255923.2-202ENST00000620833 2874 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RTN4Q9NQC3 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RTN4Q9NQC3 GPRASP1-202ENST00000415986 5877 ntAPPRIS P1 TSL 4 BASIC17.67■□□□□ 0.42
RTN4Q9NQC3 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RTN4Q9NQC3 PCDHGA3-201ENST00000253812 4771 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
RTN4Q9NQC3 PRR3-202ENST00000376560 2254 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RTN4Q9NQC3 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
RTN4Q9NQC3 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
RTN4Q9NQC3 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
RTN4Q9NQC3 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
RTN4Q9NQC3 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RTN4Q9NQC3 OR51B4-201ENST00000380224 933 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
RTN4Q9NQC3 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
RTN4Q9NQC3 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC17.67■□□□□ 0.42
RTN4Q9NQC3 AL031284.1-201ENST00000419297 478 ntBASIC17.67■□□□□ 0.42
RTN4Q9NQC3 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC17.67■□□□□ 0.42
RTN4Q9NQC3 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
RTN4Q9NQC3 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC17.67■□□□□ 0.42
RTN4Q9NQC3 CALM3-211ENST00000598871 561 ntTSL 4 BASIC17.67■□□□□ 0.42
RTN4Q9NQC3 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
RTN4Q9NQC3 AC116407.3-201ENST00000623905 1129 ntBASIC17.67■□□□□ 0.42
RTN4Q9NQC3 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC17.67■□□□□ 0.42
RTN4Q9NQC3 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RTN4Q9NQC3 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
RTN4Q9NQC3 SAMD4A-201ENST00000251091 6565 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RTN4Q9NQC3 TRAPPC9-201ENST00000389328 4474 ntTSL 2 BASIC17.67■□□□□ 0.42
RTN4Q9NQC3 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RTN4Q9NQC3 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RTN4Q9NQC3 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
RTN4Q9NQC3 PNMA5-204ENST00000452693 3113 ntAPPRIS P2 TSL 2 BASIC17.67■□□□□ 0.42
RTN4Q9NQC3 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
RTN4Q9NQC3 ENOX1-201ENST00000261488 2982 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RTN4Q9NQC3 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
RTN4Q9NQC3 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RTN4Q9NQC3 MGRN1-203ENST00000415496 6405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
RTN4Q9NQC3 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
RTN4Q9NQC3 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC17.66■□□□□ 0.42
RTN4Q9NQC3 PSMD11-201ENST00000261712 4098 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RTN4Q9NQC3 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
RTN4Q9NQC3 AL138847.2-201ENST00000624477 1819 ntBASIC17.66■□□□□ 0.42
RTN4Q9NQC3 GRM2-202ENST00000395052 3151 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
RTN4Q9NQC3 DLGAP2-201ENST00000421627 3165 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
RTN4Q9NQC3 APOBR-202ENST00000564831 3792 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
RTN4Q9NQC3 TMEM121B-202ENST00000399875 3961 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
RTN4Q9NQC3 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
RTN4Q9NQC3 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RTN4Q9NQC3 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
RTN4Q9NQC3 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC17.66■□□□□ 0.42
RTN4Q9NQC3 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
RTN4Q9NQC3 BX005214.2-201ENST00000423499 1077 ntTSL 5 BASIC17.66■□□□□ 0.42
RTN4Q9NQC3 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC17.66■□□□□ 0.42
RTN4Q9NQC3 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
RTN4Q9NQC3 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
RTN4Q9NQC3 AC140658.5-201ENST00000438532 169 ntBASIC17.66■□□□□ 0.42
RTN4Q9NQC3 AC003075.1-206ENST00000448664 541 ntTSL 3 BASIC17.66■□□□□ 0.42
RTN4Q9NQC3 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
RTN4Q9NQC3 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC17.66■□□□□ 0.42
RTN4Q9NQC3 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC17.66■□□□□ 0.42
RTN4Q9NQC3 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC17.66■□□□□ 0.42
RTN4Q9NQC3 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC17.66■□□□□ 0.42
RTN4Q9NQC3 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC17.66■□□□□ 0.42
RTN4Q9NQC3 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC17.66■□□□□ 0.42
RTN4Q9NQC3 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC17.66■□□□□ 0.42
RTN4Q9NQC3 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC17.66■□□□□ 0.42
RTN4Q9NQC3 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
RTN4Q9NQC3 AC100814.1-201ENST00000606963 623 ntBASIC17.66■□□□□ 0.42
RTN4Q9NQC3 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC17.66■□□□□ 0.42
RTN4Q9NQC3 AL773604.1-201ENST00000617417 272 ntBASIC17.66■□□□□ 0.42
RTN4Q9NQC3 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RTN4Q9NQC3 ILDR1-201ENST00000273691 2659 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
RTN4Q9NQC3 CIPC-201ENST00000361786 4486 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RTN4Q9NQC3 DUOX2-205ENST00000603300 6345 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
RTN4Q9NQC3 TJAP1-201ENST00000259751 2720 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
RTN4Q9NQC3 CYP4F11-201ENST00000248041 2977 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RTN4Q9NQC3 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms