Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC13.31□□□□□ -0.28
CHD8Q9HCK8 AADAT-206ENST00000509167 2113 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CHD8Q9HCK8 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CHD8Q9HCK8 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CHD8Q9HCK8 CEBPZOS-203ENST00000397226 1499 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
CHD8Q9HCK8 TMEM56-RWDD3-202ENST00000604534 1491 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
CHD8Q9HCK8 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CHD8Q9HCK8 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
CHD8Q9HCK8 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC13.31□□□□□ -0.28
CHD8Q9HCK8 LINC02344-201ENST00000443576 644 ntTSL 2 BASIC13.31□□□□□ -0.28
CHD8Q9HCK8 AC093700.1-201ENST00000503348 717 ntBASIC13.31□□□□□ -0.28
CHD8Q9HCK8 AC005740.1-201ENST00000515639 522 ntBASIC13.31□□□□□ -0.28
CHD8Q9HCK8 VEGFA-219ENST00000518824 606 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CHD8Q9HCK8 FAM223B-202ENST00000598177 713 ntBASIC13.31□□□□□ -0.28
CHD8Q9HCK8 RPS5-205ENST00000598495 800 ntTSL 3 BASIC13.31□□□□□ -0.28
CHD8Q9HCK8 AC090004.1-201ENST00000608606 653 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
CHD8Q9HCK8 PDZRN3-AS1-203ENST00000608743 780 ntTSL 5 BASIC13.31□□□□□ -0.28
CHD8Q9HCK8 AC073869.4-201ENST00000620841 800 ntBASIC13.31□□□□□ -0.28
CHD8Q9HCK8 FAM223A-202ENST00000625204 713 ntBASIC13.31□□□□□ -0.28
CHD8Q9HCK8 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CHD8Q9HCK8 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
CHD8Q9HCK8 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CHD8Q9HCK8 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CHD8Q9HCK8 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CHD8Q9HCK8 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CHD8Q9HCK8 FAM83A-AS1-202ENST00000520576 1347 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CHD8Q9HCK8 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
CHD8Q9HCK8 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
CHD8Q9HCK8 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
CHD8Q9HCK8 WNT8A-202ENST00000398754 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CHD8Q9HCK8 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
CHD8Q9HCK8 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CHD8Q9HCK8 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC13.31□□□□□ -0.28
CHD8Q9HCK8 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CHD8Q9HCK8 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC13.3□□□□□ -0.28
CHD8Q9HCK8 CSRP2-201ENST00000311083 943 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CHD8Q9HCK8 OAZ3-201ENST00000321531 851 ntTSL 5 BASIC13.3□□□□□ -0.28
CHD8Q9HCK8 CD300LG-203ENST00000377203 1060 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
CHD8Q9HCK8 AC078882.1-201ENST00000436132 416 ntTSL 2 BASIC13.3□□□□□ -0.28
CHD8Q9HCK8 AC004771.1-201ENST00000438266 583 ntTSL 2 BASIC13.3□□□□□ -0.28
CHD8Q9HCK8 AC007679.1-201ENST00000458609 502 ntBASIC13.3□□□□□ -0.28
CHD8Q9HCK8 PARVG-208ENST00000466375 820 ntTSL 2 BASIC13.3□□□□□ -0.28
CHD8Q9HCK8 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC13.3□□□□□ -0.28
CHD8Q9HCK8 FAM213AP2-201ENST00000521579 683 ntBASIC13.3□□□□□ -0.28
CHD8Q9HCK8 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC13.3□□□□□ -0.28
CHD8Q9HCK8 CSRP2-203ENST00000547435 632 ntTSL 2 BASIC13.3□□□□□ -0.28
CHD8Q9HCK8 AC091769.1-201ENST00000619576 568 ntBASIC13.3□□□□□ -0.28
CHD8Q9HCK8 AC114296.1-202ENST00000638019 771 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
CHD8Q9HCK8 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CHD8Q9HCK8 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CHD8Q9HCK8 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
CHD8Q9HCK8 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
CHD8Q9HCK8 AC069061.4-201ENST00000581294 1347 ntBASIC13.3□□□□□ -0.28
CHD8Q9HCK8 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
CHD8Q9HCK8 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CHD8Q9HCK8 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
CHD8Q9HCK8 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CHD8Q9HCK8 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CHD8Q9HCK8 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CHD8Q9HCK8 HRH2-202ENST00000377291 2561 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CHD8Q9HCK8 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
CHD8Q9HCK8 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CHD8Q9HCK8 CELA3A-201ENST00000290122 887 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CHD8Q9HCK8 OR51B5-201ENST00000300773 939 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
CHD8Q9HCK8 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
CHD8Q9HCK8 BPIFA4P-201ENST00000375465 1203 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CHD8Q9HCK8 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CHD8Q9HCK8 AC073210.1-201ENST00000414799 232 ntBASIC13.3□□□□□ -0.28
CHD8Q9HCK8 PRRX2-AS1-201ENST00000440413 429 ntTSL 2 BASIC13.3□□□□□ -0.28
CHD8Q9HCK8 C21orf62-204ENST00000490358 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CHD8Q9HCK8 BATF-202ENST00000555504 361 ntTSL 2 BASIC13.3□□□□□ -0.28
CHD8Q9HCK8 TPPP3-205ENST00000564104 1736 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CHD8Q9HCK8 ETV4-208ENST00000586826 917 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CHD8Q9HCK8 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC13.3□□□□□ -0.28
CHD8Q9HCK8 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CHD8Q9HCK8 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CHD8Q9HCK8 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
CHD8Q9HCK8 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CHD8Q9HCK8 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
CHD8Q9HCK8 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CHD8Q9HCK8 OSCP1-201ENST00000235532 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CHD8Q9HCK8 OSCP1-203ENST00000356637 1463 ntTSL 5 BASIC13.3□□□□□ -0.28
CHD8Q9HCK8 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC13.3□□□□□ -0.28
CHD8Q9HCK8 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
CHD8Q9HCK8 HTR3E-205ENST00000436361 1371 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CHD8Q9HCK8 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
CHD8Q9HCK8 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC13.3□□□□□ -0.28
CHD8Q9HCK8 ZNF684-201ENST00000372696 1009 ntTSL 3 BASIC13.29□□□□□ -0.28
CHD8Q9HCK8 KRT18P33-201ENST00000398525 1043 ntBASIC13.29□□□□□ -0.28
CHD8Q9HCK8 IQCF4-203ENST00000428561 420 ntBASIC13.29□□□□□ -0.28
CHD8Q9HCK8 MED19-202ENST00000431606 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CHD8Q9HCK8 NME6-211ENST00000447314 621 ntTSL 3 BASIC13.29□□□□□ -0.28
CHD8Q9HCK8 GIMAP6-202ENST00000493969 876 ntTSL 2 BASIC13.29□□□□□ -0.28
CHD8Q9HCK8 RN7SKP155-201ENST00000516031 288 ntBASIC13.29□□□□□ -0.28
CHD8Q9HCK8 TPP1-209ENST00000528657 578 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CHD8Q9HCK8 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CHD8Q9HCK8 AL139317.2-201ENST00000556998 158 ntBASIC13.29□□□□□ -0.28
CHD8Q9HCK8 TIMM23-201ENST00000580018 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CHD8Q9HCK8 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CHD8Q9HCK8 AC126755.5-201ENST00000622756 267 ntBASIC13.29□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms