Protein–RNA interactions for Protein: Q99952

PTPN18, Tyrosine-protein phosphatase non-receptor type 18, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18Q99952 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
PTPN18Q99952 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
PTPN18Q99952 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PTPN18Q99952 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PTPN18Q99952 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC16.54■□□□□ 0.24
PTPN18Q99952 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC16.54■□□□□ 0.24
PTPN18Q99952 UBOX5-AS1-201ENST00000446537 1792 ntTSL 2 BASIC16.54■□□□□ 0.24
PTPN18Q99952 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PTPN18Q99952 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.53■□□□□ 0.24
PTPN18Q99952 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC16.53■□□□□ 0.24
PTPN18Q99952 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC16.53■□□□□ 0.24
PTPN18Q99952 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PTPN18Q99952 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PTPN18Q99952 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PTPN18Q99952 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PTPN18Q99952 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PTPN18Q99952 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
PTPN18Q99952 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
PTPN18Q99952 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.53■□□□□ 0.24
PTPN18Q99952 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PTPN18Q99952 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC16.53■□□□□ 0.24
PTPN18Q99952 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PTPN18Q99952 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC16.53■□□□□ 0.24
PTPN18Q99952 DSCAM-AS1-202ENST00000427451 1640 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PTPN18Q99952 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC16.53■□□□□ 0.24
PTPN18Q99952 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
PTPN18Q99952 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PTPN18Q99952 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PTPN18Q99952 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.53■□□□□ 0.24
PTPN18Q99952 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
PTPN18Q99952 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PTPN18Q99952 AL157832.2-206ENST00000428178 601 ntTSL 3 BASIC16.53■□□□□ 0.24
PTPN18Q99952 DEPDC1-AS1-201ENST00000428732 1247 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PTPN18Q99952 BRI3P1-201ENST00000440440 378 ntBASIC16.53■□□□□ 0.24
PTPN18Q99952 AC122719.1-201ENST00000507989 559 ntTSL 4 BASIC16.53■□□□□ 0.24
PTPN18Q99952 KRT18P37-201ENST00000520711 1282 ntBASIC16.53■□□□□ 0.24
PTPN18Q99952 CYB561A3-208ENST00000536915 1094 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
PTPN18Q99952 COX5A-205ENST00000568517 582 ntTSL 3 BASIC16.53■□□□□ 0.24
PTPN18Q99952 MIR6816-201ENST00000620368 66 ntBASIC16.53■□□□□ 0.24
PTPN18Q99952 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC16.53■□□□□ 0.24
PTPN18Q99952 IQSEC2-207ENST00000638583 722 ntTSL 5 BASIC16.53■□□□□ 0.24
PTPN18Q99952 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PTPN18Q99952 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
PTPN18Q99952 SF1-209ENST00000433274 2317 ntTSL 2 BASIC16.53■□□□□ 0.24
PTPN18Q99952 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC16.53■□□□□ 0.24
PTPN18Q99952 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC16.53■□□□□ 0.24
PTPN18Q99952 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC16.53■□□□□ 0.24
PTPN18Q99952 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC16.53■□□□□ 0.24
PTPN18Q99952 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC16.53■□□□□ 0.24
PTPN18Q99952 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PTPN18Q99952 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
PTPN18Q99952 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.53■□□□□ 0.24
PTPN18Q99952 F11R-206ENST00000621309 4770 ntTSL 5 BASIC16.53■□□□□ 0.24
PTPN18Q99952 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PTPN18Q99952 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PTPN18Q99952 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PTPN18Q99952 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PTPN18Q99952 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.24
PTPN18Q99952 C12orf65-204ENST00000429587 1326 ntAPPRIS P2 TSL 2 BASIC16.52■□□□□ 0.24
PTPN18Q99952 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.24
PTPN18Q99952 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC16.52■□□□□ 0.24
PTPN18Q99952 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
PTPN18Q99952 FAM168A-202ENST00000356467 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PTPN18Q99952 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC16.52■□□□□ 0.24
PTPN18Q99952 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PTPN18Q99952 ACE3P-201ENST00000423435 1973 ntBASIC16.52■□□□□ 0.24
PTPN18Q99952 HLA-DRB5-201ENST00000374975 1260 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
PTPN18Q99952 OR52M2P-201ENST00000414298 959 ntBASIC16.52■□□□□ 0.24
PTPN18Q99952 IGLV9-49-201ENST00000427632 409 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
PTPN18Q99952 IFI35-204ENST00000438323 1232 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
PTPN18Q99952 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC16.52■□□□□ 0.24
PTPN18Q99952 GRPEL2P1-201ENST00000453145 339 ntBASIC16.52■□□□□ 0.24
PTPN18Q99952 RN7SL788P-201ENST00000460504 316 ntBASIC16.52■□□□□ 0.24
PTPN18Q99952 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PTPN18Q99952 S100A2-205ENST00000487430 752 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PTPN18Q99952 PFN2-212ENST00000490975 858 ntTSL 4 BASIC16.52■□□□□ 0.24
PTPN18Q99952 MRPS36-204ENST00000512880 1200 ntTSL 5 BASIC16.52■□□□□ 0.24
PTPN18Q99952 VENTXP3-201ENST00000546480 773 ntBASIC16.52■□□□□ 0.24
PTPN18Q99952 FAM192A-218ENST00000567439 1086 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
PTPN18Q99952 AC010504.1-201ENST00000591311 585 ntTSL 3 BASIC16.52■□□□□ 0.24
PTPN18Q99952 AC006547.3-201ENST00000600090 583 ntTSL 3 BASIC16.52■□□□□ 0.24
PTPN18Q99952 MRPS36-205ENST00000602380 1200 ntTSL 2 BASIC16.52■□□□□ 0.24
PTPN18Q99952 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
PTPN18Q99952 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
PTPN18Q99952 ZDHHC6-201ENST00000369404 1721 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PTPN18Q99952 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC16.52■□□□□ 0.23
PTPN18Q99952 LAP3P2-201ENST00000454686 1454 ntBASIC16.52■□□□□ 0.23
PTPN18Q99952 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
PTPN18Q99952 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
PTPN18Q99952 AC019109.1-201ENST00000401725 1874 ntBASIC16.52■□□□□ 0.23
PTPN18Q99952 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
PTPN18Q99952 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.23
PTPN18Q99952 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
PTPN18Q99952 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PTPN18Q99952 RPF1-201ENST00000370654 1385 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PTPN18Q99952 ASGR1-209ENST00000619926 1384 ntTSL 5 BASIC16.51■□□□□ 0.23
PTPN18Q99952 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PTPN18Q99952 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PTPN18Q99952 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PTPN18Q99952 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms