Protein–RNA interactions for Protein: Q969W0

SPTSSA, Serine palmitoyltransferase small subunit A, humanhuman

Predictions only

Length 71 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSAQ969W0 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC12.95□□□□□ -0.34
SPTSSAQ969W0 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SPTSSAQ969W0 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
SPTSSAQ969W0 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC12.95□□□□□ -0.34
SPTSSAQ969W0 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
SPTSSAQ969W0 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC12.95□□□□□ -0.34
SPTSSAQ969W0 MIR193BHG-211ENST00000641433 5365 ntBASIC12.95□□□□□ -0.34
SPTSSAQ969W0 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SPTSSAQ969W0 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
SPTSSAQ969W0 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SPTSSAQ969W0 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SPTSSAQ969W0 RN7SKP230-201ENST00000365642 335 ntBASIC12.95□□□□□ -0.34
SPTSSAQ969W0 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SPTSSAQ969W0 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC12.95□□□□□ -0.34
SPTSSAQ969W0 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
SPTSSAQ969W0 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC12.95□□□□□ -0.34
SPTSSAQ969W0 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC12.95□□□□□ -0.34
SPTSSAQ969W0 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC12.95□□□□□ -0.34
SPTSSAQ969W0 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC12.95□□□□□ -0.34
SPTSSAQ969W0 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC12.95□□□□□ -0.34
SPTSSAQ969W0 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
SPTSSAQ969W0 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
SPTSSAQ969W0 AP001889.1-201ENST00000525414 633 ntBASIC12.95□□□□□ -0.34
SPTSSAQ969W0 POLE2-203ENST00000553805 496 ntTSL 2 BASIC12.95□□□□□ -0.34
SPTSSAQ969W0 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC12.95□□□□□ -0.34
SPTSSAQ969W0 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC12.95□□□□□ -0.34
SPTSSAQ969W0 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC12.95□□□□□ -0.34
SPTSSAQ969W0 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC12.95□□□□□ -0.34
SPTSSAQ969W0 MIR6074-201ENST00000612054 107 ntBASIC12.95□□□□□ -0.34
SPTSSAQ969W0 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC12.95□□□□□ -0.34
SPTSSAQ969W0 AC025048.6-201ENST00000634326 1161 ntBASIC12.95□□□□□ -0.34
SPTSSAQ969W0 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC12.95□□□□□ -0.34
SPTSSAQ969W0 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SPTSSAQ969W0 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
SPTSSAQ969W0 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
SPTSSAQ969W0 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SPTSSAQ969W0 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
SPTSSAQ969W0 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SPTSSAQ969W0 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC12.95□□□□□ -0.34
SPTSSAQ969W0 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC12.95□□□□□ -0.34
SPTSSAQ969W0 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SPTSSAQ969W0 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC12.95□□□□□ -0.34
SPTSSAQ969W0 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SPTSSAQ969W0 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SPTSSAQ969W0 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SPTSSAQ969W0 AC027601.5-201ENST00000624065 2482 ntBASIC12.95□□□□□ -0.34
SPTSSAQ969W0 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC12.95□□□□□ -0.34
SPTSSAQ969W0 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SPTSSAQ969W0 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
SPTSSAQ969W0 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SPTSSAQ969W0 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SPTSSAQ969W0 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC12.94□□□□□ -0.34
SPTSSAQ969W0 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
SPTSSAQ969W0 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SPTSSAQ969W0 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
SPTSSAQ969W0 PDGFRB-201ENST00000261799 5717 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SPTSSAQ969W0 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SPTSSAQ969W0 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SPTSSAQ969W0 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
SPTSSAQ969W0 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SPTSSAQ969W0 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC12.94□□□□□ -0.34
SPTSSAQ969W0 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
SPTSSAQ969W0 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SPTSSAQ969W0 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SPTSSAQ969W0 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SPTSSAQ969W0 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
SPTSSAQ969W0 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC12.94□□□□□ -0.34
SPTSSAQ969W0 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SPTSSAQ969W0 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SPTSSAQ969W0 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC12.94□□□□□ -0.34
SPTSSAQ969W0 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SPTSSAQ969W0 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SPTSSAQ969W0 USP4-203ENST00000415188 1454 ntTSL 3 BASIC12.94□□□□□ -0.34
SPTSSAQ969W0 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SPTSSAQ969W0 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SPTSSAQ969W0 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SPTSSAQ969W0 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SPTSSAQ969W0 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
SPTSSAQ969W0 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SPTSSAQ969W0 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
SPTSSAQ969W0 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SPTSSAQ969W0 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC12.94□□□□□ -0.34
SPTSSAQ969W0 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
SPTSSAQ969W0 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SPTSSAQ969W0 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC12.94□□□□□ -0.34
SPTSSAQ969W0 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
SPTSSAQ969W0 PTPA-220ENST00000436883 532 ntTSL 4 BASIC12.94□□□□□ -0.34
SPTSSAQ969W0 HMGN1P19-201ENST00000436976 333 ntBASIC12.94□□□□□ -0.34
SPTSSAQ969W0 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC12.94□□□□□ -0.34
SPTSSAQ969W0 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC12.94□□□□□ -0.34
SPTSSAQ969W0 AC106760.1-201ENST00000508690 800 ntBASIC12.94□□□□□ -0.34
SPTSSAQ969W0 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
SPTSSAQ969W0 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC12.94□□□□□ -0.34
SPTSSAQ969W0 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SPTSSAQ969W0 AC025279.2-201ENST00000569730 653 ntBASIC12.94□□□□□ -0.34
SPTSSAQ969W0 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC12.94□□□□□ -0.34
SPTSSAQ969W0 AL022328.1-201ENST00000610050 478 ntBASIC12.94□□□□□ -0.34
SPTSSAQ969W0 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SPTSSAQ969W0 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC12.94□□□□□ -0.34
SPTSSAQ969W0 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms