Protein–RNA interactions for Protein: Q92576

PHF3, PHD finger protein 3, humanhuman

Known RBP Predictions only

Length 2,039 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3Q92576 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
PHF3Q92576 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
PHF3Q92576 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
PHF3Q92576 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
PHF3Q92576 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC13.28□□□□□ -0.28
PHF3Q92576 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
PHF3Q92576 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
PHF3Q92576 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
PHF3Q92576 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
PHF3Q92576 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
PHF3Q92576 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC13.28□□□□□ -0.28
PHF3Q92576 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
PHF3Q92576 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
PHF3Q92576 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
PHF3Q92576 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
PHF3Q92576 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
PHF3Q92576 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
PHF3Q92576 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
PHF3Q92576 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
PHF3Q92576 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
PHF3Q92576 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC13.28□□□□□ -0.28
PHF3Q92576 PARVG-202ENST00000415224 999 ntTSL 2 BASIC13.28□□□□□ -0.28
PHF3Q92576 FAM58BP-201ENST00000439056 645 ntBASIC13.28□□□□□ -0.28
PHF3Q92576 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC13.28□□□□□ -0.28
PHF3Q92576 RN7SL11P-201ENST00000471305 293 ntBASIC13.28□□□□□ -0.28
PHF3Q92576 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC13.28□□□□□ -0.28
PHF3Q92576 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
PHF3Q92576 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
PHF3Q92576 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
PHF3Q92576 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
PHF3Q92576 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
PHF3Q92576 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
PHF3Q92576 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
PHF3Q92576 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
PHF3Q92576 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
PHF3Q92576 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
PHF3Q92576 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
PHF3Q92576 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
PHF3Q92576 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
PHF3Q92576 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
PHF3Q92576 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
PHF3Q92576 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC13.28□□□□□ -0.28
PHF3Q92576 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
PHF3Q92576 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
PHF3Q92576 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
PHF3Q92576 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
PHF3Q92576 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC13.27□□□□□ -0.28
PHF3Q92576 AL360270.3-201ENST00000609118 1348 ntBASIC13.27□□□□□ -0.28
PHF3Q92576 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
PHF3Q92576 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
PHF3Q92576 KRT8P21-201ENST00000430398 1491 ntBASIC13.27□□□□□ -0.28
PHF3Q92576 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC13.27□□□□□ -0.28
PHF3Q92576 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
PHF3Q92576 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
PHF3Q92576 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
PHF3Q92576 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC13.27□□□□□ -0.28
PHF3Q92576 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC13.27□□□□□ -0.28
PHF3Q92576 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.28
PHF3Q92576 OARD1-204ENST00000464633 717 ntTSL 2 BASIC13.27□□□□□ -0.28
PHF3Q92576 AC125604.1-201ENST00000496255 707 ntBASIC13.27□□□□□ -0.28
PHF3Q92576 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC13.27□□□□□ -0.28
PHF3Q92576 RERG-205ENST00000537647 935 ntTSL 2 BASIC13.27□□□□□ -0.28
PHF3Q92576 FOS-206ENST00000555347 1280 ntTSL 2 BASIC13.27□□□□□ -0.28
PHF3Q92576 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
PHF3Q92576 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
PHF3Q92576 EID1-202ENST00000560490 584 ntTSL 3 BASIC13.27□□□□□ -0.28
PHF3Q92576 SYT17-208ENST00000568433 812 ntTSL 3 BASIC13.27□□□□□ -0.28
PHF3Q92576 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
PHF3Q92576 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC13.27□□□□□ -0.28
PHF3Q92576 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.28
PHF3Q92576 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC13.27□□□□□ -0.28
PHF3Q92576 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
PHF3Q92576 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC13.27□□□□□ -0.29
PHF3Q92576 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
PHF3Q92576 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
PHF3Q92576 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
PHF3Q92576 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
PHF3Q92576 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC13.27□□□□□ -0.29
PHF3Q92576 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC13.27□□□□□ -0.29
PHF3Q92576 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
PHF3Q92576 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
PHF3Q92576 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
PHF3Q92576 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
PHF3Q92576 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
PHF3Q92576 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
PHF3Q92576 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
PHF3Q92576 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.29
PHF3Q92576 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
PHF3Q92576 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
PHF3Q92576 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
PHF3Q92576 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
PHF3Q92576 AK6-201ENST00000380818 1183 ntTSL 2 BASIC13.27□□□□□ -0.29
PHF3Q92576 CRCP-204ENST00000398684 492 ntTSL 2 BASIC13.27□□□□□ -0.29
PHF3Q92576 SLC16A6P1-201ENST00000413214 1059 ntBASIC13.27□□□□□ -0.29
PHF3Q92576 AC134698.3-201ENST00000523880 214 ntBASIC13.27□□□□□ -0.29
PHF3Q92576 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.29
PHF3Q92576 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC13.27□□□□□ -0.29
PHF3Q92576 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.29
PHF3Q92576 SPCS2P2-201ENST00000603270 608 ntBASIC13.27□□□□□ -0.29
PHF3Q92576 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC13.27□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms