Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC13.04□□□□□ -0.32
AP3S1Q92572 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
AP3S1Q92572 DSTN-201ENST00000246069 3617 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
AP3S1Q92572 CYP26B1-205ENST00000546307 4331 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
AP3S1Q92572 UNC13D-201ENST00000207549 4393 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
AP3S1Q92572 NCLN-201ENST00000246117 4005 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
AP3S1Q92572 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
AP3S1Q92572 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC13.04□□□□□ -0.32
AP3S1Q92572 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC13.04□□□□□ -0.32
AP3S1Q92572 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
AP3S1Q92572 AL118506.1-201ENST00000601296 3082 ntBASIC13.04□□□□□ -0.32
AP3S1Q92572 RPS19-201ENST00000221975 500 ntTSL 3 BASIC13.04□□□□□ -0.32
AP3S1Q92572 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
AP3S1Q92572 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
AP3S1Q92572 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
AP3S1Q92572 AC074338.1-201ENST00000416825 156 ntBASIC13.04□□□□□ -0.32
AP3S1Q92572 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC13.04□□□□□ -0.32
AP3S1Q92572 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC13.04□□□□□ -0.32
AP3S1Q92572 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC13.04□□□□□ -0.32
AP3S1Q92572 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC13.04□□□□□ -0.32
AP3S1Q92572 PDPK2P-202ENST00000562415 1191 ntBASIC13.04□□□□□ -0.32
AP3S1Q92572 RARRES2P9-201ENST00000565168 469 ntBASIC13.04□□□□□ -0.32
AP3S1Q92572 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC13.04□□□□□ -0.32
AP3S1Q92572 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
AP3S1Q92572 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC13.04□□□□□ -0.32
AP3S1Q92572 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
AP3S1Q92572 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC13.04□□□□□ -0.32
AP3S1Q92572 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
AP3S1Q92572 DHX38-201ENST00000268482 4608 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
AP3S1Q92572 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
AP3S1Q92572 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC13.04□□□□□ -0.32
AP3S1Q92572 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC13.04□□□□□ -0.32
AP3S1Q92572 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
AP3S1Q92572 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC13.04□□□□□ -0.32
AP3S1Q92572 PER3-208ENST00000613533 6318 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
AP3S1Q92572 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
AP3S1Q92572 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
AP3S1Q92572 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
AP3S1Q92572 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
AP3S1Q92572 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
AP3S1Q92572 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC13.04□□□□□ -0.32
AP3S1Q92572 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
AP3S1Q92572 AC024075.2-201ENST00000598112 1473 ntBASIC13.04□□□□□ -0.32
AP3S1Q92572 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
AP3S1Q92572 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
AP3S1Q92572 RFFL-201ENST00000315249 7293 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
AP3S1Q92572 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
AP3S1Q92572 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
AP3S1Q92572 CTBP1-AS-201ENST00000625256 3886 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
AP3S1Q92572 METAP1D-201ENST00000315796 3419 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
AP3S1Q92572 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
AP3S1Q92572 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
AP3S1Q92572 LGALS9-201ENST00000302228 3018 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
AP3S1Q92572 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC13.03□□□□□ -0.32
AP3S1Q92572 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
AP3S1Q92572 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
AP3S1Q92572 ACVR1B-202ENST00000415850 1665 ntTSL 2 BASIC13.03□□□□□ -0.32
AP3S1Q92572 TP73-209ENST00000603362 1668 ntTSL 5 BASIC13.03□□□□□ -0.32
AP3S1Q92572 DLX4-206ENST00000611342 1662 ntBASIC13.03□□□□□ -0.32
AP3S1Q92572 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
AP3S1Q92572 AP1B1-202ENST00000357586 4176 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
AP3S1Q92572 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
AP3S1Q92572 FIBCD1-202ENST00000372338 3253 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
AP3S1Q92572 PCDHGB7-202ENST00000612073 2785 ntAPPRIS ALT2 BASIC13.03□□□□□ -0.32
AP3S1Q92572 AL157996.1-201ENST00000624684 2299 ntBASIC13.03□□□□□ -0.32
AP3S1Q92572 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC13.03□□□□□ -0.32
AP3S1Q92572 SLFNL1-AS1-201ENST00000626479 4800 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
AP3S1Q92572 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
AP3S1Q92572 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
AP3S1Q92572 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC13.03□□□□□ -0.32
AP3S1Q92572 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC13.03□□□□□ -0.32
AP3S1Q92572 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC13.03□□□□□ -0.32
AP3S1Q92572 AC079776.4-201ENST00000511039 504 ntBASIC13.03□□□□□ -0.32
AP3S1Q92572 RNF34-208ENST00000555076 593 ntTSL 3 BASIC13.03□□□□□ -0.32
AP3S1Q92572 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC13.03□□□□□ -0.32
AP3S1Q92572 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
AP3S1Q92572 TBCB-205ENST00000585746 875 ntTSL 3 BASIC13.03□□□□□ -0.32
AP3S1Q92572 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC13.03□□□□□ -0.32
AP3S1Q92572 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
AP3S1Q92572 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC13.03□□□□□ -0.32
AP3S1Q92572 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
AP3S1Q92572 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
AP3S1Q92572 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
AP3S1Q92572 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
AP3S1Q92572 LINC01257-201ENST00000376678 2473 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
AP3S1Q92572 RHPN1-AS1-201ENST00000518049 1918 ntBASIC13.03□□□□□ -0.32
AP3S1Q92572 AC040174.1-201ENST00000563003 2571 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
AP3S1Q92572 POLM-201ENST00000242248 2631 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
AP3S1Q92572 MKRN5P-201ENST00000445263 1467 ntBASIC13.03□□□□□ -0.32
AP3S1Q92572 IMPDH1P4-201ENST00000445028 1534 ntBASIC13.03□□□□□ -0.32
AP3S1Q92572 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC13.03□□□□□ -0.32
AP3S1Q92572 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
AP3S1Q92572 ANTXR2-203ENST00000403729 8273 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
AP3S1Q92572 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC13.03□□□□□ -0.32
AP3S1Q92572 PCDHGB3-201ENST00000576222 4727 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
AP3S1Q92572 GEM-201ENST00000297596 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
AP3S1Q92572 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.32
AP3S1Q92572 Z97205.2-201ENST00000564697 1639 ntBASIC13.02□□□□□ -0.32
AP3S1Q92572 COL2A1-201ENST00000337299 4257 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
AP3S1Q92572 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC13.02□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms