Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
TTC9CQ8N5M4 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
TTC9CQ8N5M4 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
TTC9CQ8N5M4 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC11.71□□□□□ -0.53
TTC9CQ8N5M4 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC11.71□□□□□ -0.53
TTC9CQ8N5M4 ZBTB12BP-201ENST00000314232 1122 ntBASIC11.71□□□□□ -0.53
TTC9CQ8N5M4 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
TTC9CQ8N5M4 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
TTC9CQ8N5M4 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.53
TTC9CQ8N5M4 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC11.71□□□□□ -0.53
TTC9CQ8N5M4 NME2P1-201ENST00000426182 414 ntBASIC11.71□□□□□ -0.53
TTC9CQ8N5M4 AC016694.1-201ENST00000434179 700 ntBASIC11.71□□□□□ -0.53
TTC9CQ8N5M4 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC11.71□□□□□ -0.53
TTC9CQ8N5M4 BCRP2-202ENST00000447763 634 ntBASIC11.71□□□□□ -0.53
TTC9CQ8N5M4 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
TTC9CQ8N5M4 BCRP6-201ENST00000510112 632 ntBASIC11.71□□□□□ -0.53
TTC9CQ8N5M4 BCRP7-201ENST00000511549 544 ntBASIC11.71□□□□□ -0.53
TTC9CQ8N5M4 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC11.71□□□□□ -0.53
TTC9CQ8N5M4 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC11.71□□□□□ -0.53
TTC9CQ8N5M4 AC132938.2-201ENST00000579188 680 ntBASIC11.71□□□□□ -0.53
TTC9CQ8N5M4 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC11.71□□□□□ -0.53
TTC9CQ8N5M4 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC11.71□□□□□ -0.53
TTC9CQ8N5M4 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC11.71□□□□□ -0.53
TTC9CQ8N5M4 AL591163.1-201ENST00000641757 987 ntBASIC11.71□□□□□ -0.53
TTC9CQ8N5M4 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
TTC9CQ8N5M4 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC11.71□□□□□ -0.53
TTC9CQ8N5M4 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
TTC9CQ8N5M4 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
TTC9CQ8N5M4 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
TTC9CQ8N5M4 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC11.71□□□□□ -0.54
TTC9CQ8N5M4 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC11.71□□□□□ -0.54
TTC9CQ8N5M4 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC11.71□□□□□ -0.54
TTC9CQ8N5M4 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
TTC9CQ8N5M4 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
TTC9CQ8N5M4 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
TTC9CQ8N5M4 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC11.71□□□□□ -0.54
TTC9CQ8N5M4 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
TTC9CQ8N5M4 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC11.7□□□□□ -0.54
TTC9CQ8N5M4 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
TTC9CQ8N5M4 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC11.7□□□□□ -0.54
TTC9CQ8N5M4 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
TTC9CQ8N5M4 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
TTC9CQ8N5M4 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
TTC9CQ8N5M4 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
TTC9CQ8N5M4 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
TTC9CQ8N5M4 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
TTC9CQ8N5M4 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC11.7□□□□□ -0.54
TTC9CQ8N5M4 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
TTC9CQ8N5M4 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
TTC9CQ8N5M4 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC11.7□□□□□ -0.54
TTC9CQ8N5M4 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
TTC9CQ8N5M4 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC11.7□□□□□ -0.54
TTC9CQ8N5M4 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
TTC9CQ8N5M4 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
TTC9CQ8N5M4 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
TTC9CQ8N5M4 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
TTC9CQ8N5M4 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
TTC9CQ8N5M4 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
TTC9CQ8N5M4 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
TTC9CQ8N5M4 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
TTC9CQ8N5M4 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
TTC9CQ8N5M4 FES-203ENST00000394302 2133 ntTSL 5 BASIC11.7□□□□□ -0.54
TTC9CQ8N5M4 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
TTC9CQ8N5M4 COX5BP8-201ENST00000416911 349 ntBASIC11.7□□□□□ -0.54
TTC9CQ8N5M4 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC11.7□□□□□ -0.54
TTC9CQ8N5M4 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC11.7□□□□□ -0.54
TTC9CQ8N5M4 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC11.7□□□□□ -0.54
TTC9CQ8N5M4 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC11.7□□□□□ -0.54
TTC9CQ8N5M4 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC11.7□□□□□ -0.54
TTC9CQ8N5M4 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
TTC9CQ8N5M4 APRT-204ENST00000563655 709 ntTSL 5 BASIC11.7□□□□□ -0.54
TTC9CQ8N5M4 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC11.7□□□□□ -0.54
TTC9CQ8N5M4 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
TTC9CQ8N5M4 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
TTC9CQ8N5M4 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC11.7□□□□□ -0.54
TTC9CQ8N5M4 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
TTC9CQ8N5M4 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
TTC9CQ8N5M4 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC11.7□□□□□ -0.54
TTC9CQ8N5M4 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
TTC9CQ8N5M4 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
TTC9CQ8N5M4 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
TTC9CQ8N5M4 ANKRD30BP2-201ENST00000435744 1610 ntBASIC11.7□□□□□ -0.54
TTC9CQ8N5M4 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
TTC9CQ8N5M4 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC11.7□□□□□ -0.54
TTC9CQ8N5M4 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
TTC9CQ8N5M4 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC11.7□□□□□ -0.54
TTC9CQ8N5M4 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC11.7□□□□□ -0.54
TTC9CQ8N5M4 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC11.7□□□□□ -0.54
TTC9CQ8N5M4 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
TTC9CQ8N5M4 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
TTC9CQ8N5M4 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
TTC9CQ8N5M4 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
TTC9CQ8N5M4 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
TTC9CQ8N5M4 CACNA1G-208ENST00000442258 7226 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
TTC9CQ8N5M4 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC11.7□□□□□ -0.54
TTC9CQ8N5M4 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC11.7□□□□□ -0.54
TTC9CQ8N5M4 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC11.7□□□□□ -0.54
TTC9CQ8N5M4 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
TTC9CQ8N5M4 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC11.7□□□□□ -0.54
TTC9CQ8N5M4 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms