Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
IRX3P78415 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
IRX3P78415 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
IRX3P78415 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
IRX3P78415 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC17.24■□□□□ 0.35
IRX3P78415 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC17.24■□□□□ 0.35
IRX3P78415 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
IRX3P78415 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
IRX3P78415 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
IRX3P78415 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC17.24■□□□□ 0.35
IRX3P78415 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
IRX3P78415 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC17.24■□□□□ 0.35
IRX3P78415 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
IRX3P78415 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
IRX3P78415 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
IRX3P78415 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
IRX3P78415 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
IRX3P78415 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
IRX3P78415 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC17.23■□□□□ 0.35
IRX3P78415 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
IRX3P78415 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
IRX3P78415 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
IRX3P78415 AL031728.1-201ENST00000449034 2479 ntTSL 3 BASIC17.23■□□□□ 0.35
IRX3P78415 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
IRX3P78415 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
IRX3P78415 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
IRX3P78415 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC17.23■□□□□ 0.35
IRX3P78415 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
IRX3P78415 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
IRX3P78415 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC17.23■□□□□ 0.35
IRX3P78415 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC17.23■□□□□ 0.35
IRX3P78415 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC17.23■□□□□ 0.35
IRX3P78415 AC019193.1-201ENST00000506678 823 ntBASIC17.23■□□□□ 0.35
IRX3P78415 SCARNA21-201ENST00000517026 139 ntBASIC17.23■□□□□ 0.35
IRX3P78415 LY6E-208ENST00000520531 490 ntTSL 2 BASIC17.23■□□□□ 0.35
IRX3P78415 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC17.23■□□□□ 0.35
IRX3P78415 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC17.23■□□□□ 0.35
IRX3P78415 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC17.23■□□□□ 0.35
IRX3P78415 AC242376.1-201ENST00000559033 726 ntBASIC17.23■□□□□ 0.35
IRX3P78415 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC17.23■□□□□ 0.35
IRX3P78415 AC005962.1-201ENST00000584100 773 ntBASIC17.23■□□□□ 0.35
IRX3P78415 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC17.23■□□□□ 0.35
IRX3P78415 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
IRX3P78415 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
IRX3P78415 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
IRX3P78415 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC17.23■□□□□ 0.35
IRX3P78415 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
IRX3P78415 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
IRX3P78415 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
IRX3P78415 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
IRX3P78415 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
IRX3P78415 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC17.23■□□□□ 0.35
IRX3P78415 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
IRX3P78415 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC17.23■□□□□ 0.35
IRX3P78415 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
IRX3P78415 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
IRX3P78415 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
IRX3P78415 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC17.23■□□□□ 0.35
IRX3P78415 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
IRX3P78415 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC17.22■□□□□ 0.35
IRX3P78415 AC092978.1-202ENST00000637590 1327 ntBASIC17.22■□□□□ 0.35
IRX3P78415 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
IRX3P78415 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
IRX3P78415 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
IRX3P78415 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
IRX3P78415 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
IRX3P78415 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
IRX3P78415 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
IRX3P78415 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
IRX3P78415 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
IRX3P78415 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
IRX3P78415 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
IRX3P78415 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
IRX3P78415 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
IRX3P78415 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
IRX3P78415 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
IRX3P78415 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
IRX3P78415 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
IRX3P78415 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
IRX3P78415 RPL17P11-201ENST00000417593 544 ntBASIC17.22■□□□□ 0.35
IRX3P78415 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC17.22■□□□□ 0.35
IRX3P78415 SKA2-202ENST00000437036 625 ntTSL 2 BASIC17.22■□□□□ 0.35
IRX3P78415 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC17.22■□□□□ 0.35
IRX3P78415 AC073150.1-201ENST00000450406 1084 ntBASIC17.22■□□□□ 0.35
IRX3P78415 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC17.22■□□□□ 0.35
IRX3P78415 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC17.22■□□□□ 0.35
IRX3P78415 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC17.22■□□□□ 0.35
IRX3P78415 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
IRX3P78415 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
IRX3P78415 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC17.22■□□□□ 0.35
IRX3P78415 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
IRX3P78415 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC17.22■□□□□ 0.35
IRX3P78415 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC17.22■□□□□ 0.35
IRX3P78415 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
IRX3P78415 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
IRX3P78415 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
IRX3P78415 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
IRX3P78415 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
IRX3P78415 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
IRX3P78415 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 60.5 ms