Protein–RNA interactions for Protein: P63208

SKP1, S-phase kinase-associated protein 1, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1P63208 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC14.04□□□□□ -0.16
SKP1P63208 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
SKP1P63208 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SKP1P63208 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SKP1P63208 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SKP1P63208 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SKP1P63208 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SKP1P63208 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SKP1P63208 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SKP1P63208 INE2-201ENST00000630399 1874 ntBASIC14.04□□□□□ -0.16
SKP1P63208 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC14.04□□□□□ -0.16
SKP1P63208 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SKP1P63208 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SKP1P63208 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SKP1P63208 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SKP1P63208 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SKP1P63208 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SKP1P63208 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC14.03□□□□□ -0.16
SKP1P63208 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC14.03□□□□□ -0.16
SKP1P63208 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
SKP1P63208 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
SKP1P63208 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
SKP1P63208 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SKP1P63208 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SKP1P63208 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC14.03□□□□□ -0.16
SKP1P63208 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SKP1P63208 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SKP1P63208 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SKP1P63208 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC14.03□□□□□ -0.16
SKP1P63208 OLR1-203ENST00000432556 950 ntTSL 2 BASIC14.03□□□□□ -0.16
SKP1P63208 SKA2-202ENST00000437036 625 ntTSL 2 BASIC14.03□□□□□ -0.16
SKP1P63208 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SKP1P63208 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
SKP1P63208 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SKP1P63208 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC14.03□□□□□ -0.16
SKP1P63208 RSBN1L-201ENST00000334955 6422 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
SKP1P63208 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SKP1P63208 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SKP1P63208 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
SKP1P63208 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC14.03□□□□□ -0.16
SKP1P63208 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
SKP1P63208 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SKP1P63208 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SKP1P63208 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC14.03□□□□□ -0.16
SKP1P63208 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
SKP1P63208 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SKP1P63208 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SKP1P63208 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC14.03□□□□□ -0.16
SKP1P63208 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
SKP1P63208 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC14.03□□□□□ -0.16
SKP1P63208 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
SKP1P63208 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC14.03□□□□□ -0.16
SKP1P63208 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SKP1P63208 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SKP1P63208 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SKP1P63208 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SKP1P63208 AC018529.2-202ENST00000611482 3087 ntBASIC14.03□□□□□ -0.16
SKP1P63208 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
SKP1P63208 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SKP1P63208 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
SKP1P63208 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC14.03□□□□□ -0.16
SKP1P63208 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC14.03□□□□□ -0.16
SKP1P63208 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
SKP1P63208 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.16
SKP1P63208 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
SKP1P63208 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SKP1P63208 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
SKP1P63208 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
SKP1P63208 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
SKP1P63208 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC14.02□□□□□ -0.16
SKP1P63208 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SKP1P63208 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
SKP1P63208 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC14.02□□□□□ -0.16
SKP1P63208 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SKP1P63208 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SKP1P63208 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
SKP1P63208 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
SKP1P63208 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SKP1P63208 TLK1-202ENST00000360843 5726 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
SKP1P63208 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
SKP1P63208 F10-203ENST00000409306 1450 ntTSL 3 BASIC14.02□□□□□ -0.16
SKP1P63208 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
SKP1P63208 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SKP1P63208 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC14.02□□□□□ -0.17
SKP1P63208 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SKP1P63208 APOA2-204ENST00000464492 530 ntTSL 3 BASIC14.02□□□□□ -0.17
SKP1P63208 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC14.02□□□□□ -0.17
SKP1P63208 RIT1-205ENST00000539040 919 ntTSL 2 BASIC14.02□□□□□ -0.17
SKP1P63208 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
SKP1P63208 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC14.02□□□□□ -0.17
SKP1P63208 MIR4683-201ENST00000579659 81 ntBASIC14.02□□□□□ -0.17
SKP1P63208 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SKP1P63208 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC14.02□□□□□ -0.17
SKP1P63208 AC009542.2-202ENST00000619004 1067 ntBASIC14.02□□□□□ -0.17
SKP1P63208 AC027601.3-201ENST00000622907 509 ntBASIC14.02□□□□□ -0.17
SKP1P63208 AP001002.3-201ENST00000623482 206 ntBASIC14.02□□□□□ -0.17
SKP1P63208 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
SKP1P63208 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
SKP1P63208 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SKP1P63208 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms