Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 MIR6869-201ENST00000619434 62 ntBASIC14.81□□□□□ -0.04
AP1S1P61966 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
AP1S1P61966 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
AP1S1P61966 HARS-202ENST00000415192 1401 ntTSL 2 BASIC14.81□□□□□ -0.04
AP1S1P61966 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC14.81□□□□□ -0.04
AP1S1P61966 AC015802.1-201ENST00000588104 1449 ntBASIC14.81□□□□□ -0.04
AP1S1P61966 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
AP1S1P61966 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
AP1S1P61966 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
AP1S1P61966 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
AP1S1P61966 AC018735.1-201ENST00000437208 1502 ntBASIC14.81□□□□□ -0.04
AP1S1P61966 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
AP1S1P61966 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC14.81□□□□□ -0.04
AP1S1P61966 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC14.81□□□□□ -0.04
AP1S1P61966 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC14.81□□□□□ -0.04
AP1S1P61966 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
AP1S1P61966 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
AP1S1P61966 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
AP1S1P61966 TK2-221ENST00000620035 5060 ntTSL 2 BASIC14.81□□□□□ -0.04
AP1S1P61966 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
AP1S1P61966 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
AP1S1P61966 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
AP1S1P61966 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
AP1S1P61966 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
AP1S1P61966 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
AP1S1P61966 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
AP1S1P61966 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
AP1S1P61966 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC14.8□□□□□ -0.04
AP1S1P61966 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
AP1S1P61966 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
AP1S1P61966 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
AP1S1P61966 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
AP1S1P61966 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
AP1S1P61966 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
AP1S1P61966 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
AP1S1P61966 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC14.8□□□□□ -0.04
AP1S1P61966 GAS5-209ENST00000430245 723 ntTSL 3 BASIC14.8□□□□□ -0.04
AP1S1P61966 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC14.8□□□□□ -0.04
AP1S1P61966 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC14.8□□□□□ -0.04
AP1S1P61966 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC14.8□□□□□ -0.04
AP1S1P61966 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC14.8□□□□□ -0.04
AP1S1P61966 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
AP1S1P61966 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC14.8□□□□□ -0.04
AP1S1P61966 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC14.8□□□□□ -0.04
AP1S1P61966 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
AP1S1P61966 LINC00552-201ENST00000625151 2579 ntBASIC14.8□□□□□ -0.04
AP1S1P61966 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
AP1S1P61966 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
AP1S1P61966 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC14.8□□□□□ -0.04
AP1S1P61966 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC14.8□□□□□ -0.04
AP1S1P61966 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
AP1S1P61966 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
AP1S1P61966 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
AP1S1P61966 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC14.8□□□□□ -0.04
AP1S1P61966 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
AP1S1P61966 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
AP1S1P61966 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
AP1S1P61966 AC215219.1-201ENST00000400706 1817 ntBASIC14.8□□□□□ -0.04
AP1S1P61966 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC14.8□□□□□ -0.04
AP1S1P61966 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
AP1S1P61966 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC14.8□□□□□ -0.04
AP1S1P61966 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
AP1S1P61966 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
AP1S1P61966 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
AP1S1P61966 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC14.79□□□□□ -0.04
AP1S1P61966 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
AP1S1P61966 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
AP1S1P61966 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
AP1S1P61966 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
AP1S1P61966 AC007686.3-201ENST00000619017 3487 ntBASIC14.79□□□□□ -0.04
AP1S1P61966 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
AP1S1P61966 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
AP1S1P61966 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
AP1S1P61966 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
AP1S1P61966 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
AP1S1P61966 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
AP1S1P61966 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
AP1S1P61966 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
AP1S1P61966 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
AP1S1P61966 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
AP1S1P61966 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
AP1S1P61966 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
AP1S1P61966 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC14.79□□□□□ -0.04
AP1S1P61966 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
AP1S1P61966 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
AP1S1P61966 AC006033.1-201ENST00000440505 426 ntBASIC14.79□□□□□ -0.04
AP1S1P61966 RNMTL1P1-201ENST00000454103 560 ntBASIC14.79□□□□□ -0.04
AP1S1P61966 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
AP1S1P61966 C8orf49-201ENST00000525043 1968 ntBASIC14.79□□□□□ -0.04
AP1S1P61966 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
AP1S1P61966 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC14.79□□□□□ -0.04
AP1S1P61966 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC14.79□□□□□ -0.04
AP1S1P61966 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC14.79□□□□□ -0.04
AP1S1P61966 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC14.79□□□□□ -0.04
AP1S1P61966 MIR4538-201ENST00000581377 78 ntBASIC14.79□□□□□ -0.04
AP1S1P61966 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC14.79□□□□□ -0.04
AP1S1P61966 AC005962.1-201ENST00000584100 773 ntBASIC14.79□□□□□ -0.04
AP1S1P61966 AL118558.3-201ENST00000607414 1079 ntBASIC14.79□□□□□ -0.04
AP1S1P61966 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC14.79□□□□□ -0.04
AP1S1P61966 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms