Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
SRP54P61011 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SRP54P61011 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
SRP54P61011 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC14.58□□□□□ -0.08
SRP54P61011 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
SRP54P61011 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
SRP54P61011 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC14.58□□□□□ -0.08
SRP54P61011 AL008707.1-201ENST00000422498 534 ntBASIC14.58□□□□□ -0.08
SRP54P61011 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SRP54P61011 SKA2-202ENST00000437036 625 ntTSL 2 BASIC14.58□□□□□ -0.08
SRP54P61011 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC14.58□□□□□ -0.08
SRP54P61011 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC14.58□□□□□ -0.08
SRP54P61011 OARD1-204ENST00000464633 717 ntTSL 2 BASIC14.58□□□□□ -0.08
SRP54P61011 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
SRP54P61011 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC14.58□□□□□ -0.08
SRP54P61011 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC14.58□□□□□ -0.08
SRP54P61011 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC14.58□□□□□ -0.08
SRP54P61011 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC14.58□□□□□ -0.08
SRP54P61011 AL021578.1-201ENST00000613646 709 ntBASIC14.58□□□□□ -0.08
SRP54P61011 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC14.58□□□□□ -0.08
SRP54P61011 AL136295.7-201ENST00000619226 1200 ntBASIC14.58□□□□□ -0.08
SRP54P61011 AC027601.3-201ENST00000622907 509 ntBASIC14.58□□□□□ -0.08
SRP54P61011 PCBP2-OT1-201ENST00000634357 590 ntBASIC14.58□□□□□ -0.08
SRP54P61011 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC14.58□□□□□ -0.08
SRP54P61011 AC068587.8-201ENST00000641239 219 ntBASIC14.58□□□□□ -0.08
SRP54P61011 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SRP54P61011 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
SRP54P61011 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
SRP54P61011 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
SRP54P61011 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
SRP54P61011 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SRP54P61011 TUBBP5-203ENST00000508529 1334 ntBASIC14.58□□□□□ -0.08
SRP54P61011 AMT-239ENST00000636865 1914 ntTSL 5 BASIC14.58□□□□□ -0.08
SRP54P61011 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
SRP54P61011 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
SRP54P61011 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
SRP54P61011 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC14.58□□□□□ -0.08
SRP54P61011 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SRP54P61011 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
SRP54P61011 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
SRP54P61011 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
SRP54P61011 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
SRP54P61011 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
SRP54P61011 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC14.57□□□□□ -0.08
SRP54P61011 TNRC18P2-201ENST00000417666 2714 ntBASIC14.57□□□□□ -0.08
SRP54P61011 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
SRP54P61011 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC14.57□□□□□ -0.08
SRP54P61011 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
SRP54P61011 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SRP54P61011 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SRP54P61011 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC14.57□□□□□ -0.08
SRP54P61011 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
SRP54P61011 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC14.57□□□□□ -0.08
SRP54P61011 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
SRP54P61011 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SRP54P61011 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SRP54P61011 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
SRP54P61011 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SRP54P61011 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
SRP54P61011 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
SRP54P61011 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC14.57□□□□□ -0.08
SRP54P61011 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
SRP54P61011 SDCCAG3P2-201ENST00000326105 1023 ntBASIC14.57□□□□□ -0.08
SRP54P61011 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC14.57□□□□□ -0.08
SRP54P61011 NPPA-201ENST00000376476 728 ntTSL 3 BASIC14.57□□□□□ -0.08
SRP54P61011 MIR769-201ENST00000390225 118 ntBASIC14.57□□□□□ -0.08
SRP54P61011 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
SRP54P61011 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SRP54P61011 CYP46A4P-201ENST00000414953 267 ntBASIC14.57□□□□□ -0.08
SRP54P61011 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC14.57□□□□□ -0.08
SRP54P61011 KRTAP19-9P-201ENST00000421795 191 ntBASIC14.57□□□□□ -0.08
SRP54P61011 AC011742.3-201ENST00000439053 820 ntBASIC14.57□□□□□ -0.08
SRP54P61011 AC012441.2-201ENST00000444843 739 ntBASIC14.57□□□□□ -0.08
SRP54P61011 PUDPP3-201ENST00000445368 636 ntBASIC14.57□□□□□ -0.08
SRP54P61011 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SRP54P61011 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC14.57□□□□□ -0.08
SRP54P61011 RPL18P13-201ENST00000478088 569 ntBASIC14.57□□□□□ -0.08
SRP54P61011 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC14.57□□□□□ -0.08
SRP54P61011 AC022217.1-201ENST00000521069 738 ntBASIC14.57□□□□□ -0.08
SRP54P61011 SDHD-202ENST00000525291 790 ntTSL 3 BASIC14.57□□□□□ -0.08
SRP54P61011 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC14.57□□□□□ -0.08
SRP54P61011 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC14.57□□□□□ -0.08
SRP54P61011 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
SRP54P61011 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC14.57□□□□□ -0.08
SRP54P61011 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
SRP54P61011 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC14.57□□□□□ -0.08
SRP54P61011 PPA1-206ENST00000625364 644 ntTSL 5 BASIC14.57□□□□□ -0.08
SRP54P61011 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
SRP54P61011 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC14.57□□□□□ -0.08
SRP54P61011 AC091951.1-201ENST00000512854 2465 ntBASIC14.57□□□□□ -0.08
SRP54P61011 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SRP54P61011 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SRP54P61011 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SRP54P61011 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SRP54P61011 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
SRP54P61011 AC007292.2-201ENST00000593524 1812 ntBASIC14.57□□□□□ -0.08
SRP54P61011 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SRP54P61011 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SRP54P61011 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
SRP54P61011 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms