Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
RNF144AP50876 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RNF144AP50876 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
RNF144AP50876 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC13.81□□□□□ -0.2
RNF144AP50876 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
RNF144AP50876 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RNF144AP50876 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RNF144AP50876 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
RNF144AP50876 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC13.81□□□□□ -0.2
RNF144AP50876 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC13.81□□□□□ -0.2
RNF144AP50876 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC13.81□□□□□ -0.2
RNF144AP50876 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RNF144AP50876 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC13.81□□□□□ -0.2
RNF144AP50876 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
RNF144AP50876 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
RNF144AP50876 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RNF144AP50876 PGGT1BP2-201ENST00000398621 1028 ntBASIC13.81□□□□□ -0.2
RNF144AP50876 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC13.81□□□□□ -0.2
RNF144AP50876 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC13.81□□□□□ -0.2
RNF144AP50876 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC13.81□□□□□ -0.2
RNF144AP50876 AC012441.1-201ENST00000446669 685 ntBASIC13.81□□□□□ -0.2
RNF144AP50876 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
RNF144AP50876 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
RNF144AP50876 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
RNF144AP50876 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC13.81□□□□□ -0.2
RNF144AP50876 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
RNF144AP50876 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC13.81□□□□□ -0.2
RNF144AP50876 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC13.81□□□□□ -0.2
RNF144AP50876 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC13.81□□□□□ -0.2
RNF144AP50876 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
RNF144AP50876 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RNF144AP50876 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
RNF144AP50876 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC13.81□□□□□ -0.2
RNF144AP50876 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC13.81□□□□□ -0.2
RNF144AP50876 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
RNF144AP50876 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
RNF144AP50876 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
RNF144AP50876 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
RNF144AP50876 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RNF144AP50876 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
RNF144AP50876 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
RNF144AP50876 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC13.81□□□□□ -0.2
RNF144AP50876 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
RNF144AP50876 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
RNF144AP50876 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
RNF144AP50876 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RNF144AP50876 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
RNF144AP50876 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
RNF144AP50876 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RNF144AP50876 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
RNF144AP50876 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RNF144AP50876 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
RNF144AP50876 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC13.8□□□□□ -0.2
RNF144AP50876 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
RNF144AP50876 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
RNF144AP50876 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RNF144AP50876 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC13.8□□□□□ -0.2
RNF144AP50876 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC13.8□□□□□ -0.2
RNF144AP50876 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
RNF144AP50876 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RNF144AP50876 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RNF144AP50876 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
RNF144AP50876 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC13.8□□□□□ -0.2
RNF144AP50876 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RNF144AP50876 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC13.8□□□□□ -0.2
RNF144AP50876 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RNF144AP50876 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC13.8□□□□□ -0.2
RNF144AP50876 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
RNF144AP50876 AL512384.1-201ENST00000406683 331 ntBASIC13.8□□□□□ -0.2
RNF144AP50876 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC13.8□□□□□ -0.2
RNF144AP50876 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC13.8□□□□□ -0.2
RNF144AP50876 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC13.8□□□□□ -0.2
RNF144AP50876 TAF8-206ENST00000472818 719 ntTSL 2 BASIC13.8□□□□□ -0.2
RNF144AP50876 GIMAP3P-201ENST00000495150 836 ntBASIC13.8□□□□□ -0.2
RNF144AP50876 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RNF144AP50876 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
RNF144AP50876 AP001889.1-201ENST00000525414 633 ntBASIC13.8□□□□□ -0.2
RNF144AP50876 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
RNF144AP50876 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC13.8□□□□□ -0.2
RNF144AP50876 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RNF144AP50876 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC13.8□□□□□ -0.2
RNF144AP50876 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RNF144AP50876 AC027307.3-201ENST00000594262 1100 ntBASIC13.8□□□□□ -0.2
RNF144AP50876 AC244669.2-201ENST00000612320 853 ntBASIC13.8□□□□□ -0.2
RNF144AP50876 AC105233.6-201ENST00000642093 218 ntBASIC13.8□□□□□ -0.2
RNF144AP50876 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
RNF144AP50876 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
RNF144AP50876 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
RNF144AP50876 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
RNF144AP50876 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RNF144AP50876 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RNF144AP50876 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC13.8□□□□□ -0.2
RNF144AP50876 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
RNF144AP50876 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC13.8□□□□□ -0.2
RNF144AP50876 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
RNF144AP50876 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
RNF144AP50876 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RNF144AP50876 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
RNF144AP50876 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
RNF144AP50876 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms