Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 HIST2H2BA-201ENST00000412169 381 ntBASIC16.16■□□□□ 0.18
CPT1AP50416 NSUN5P1-203ENST00000422386 972 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CPT1AP50416 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC16.16■□□□□ 0.18
CPT1AP50416 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC16.16■□□□□ 0.18
CPT1AP50416 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC16.16■□□□□ 0.18
CPT1AP50416 MT3-203ENST00000565838 421 ntTSL 3 BASIC16.16■□□□□ 0.18
CPT1AP50416 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC16.16■□□□□ 0.18
CPT1AP50416 AP005901.3-201ENST00000581666 415 ntTSL 3 BASIC16.16■□□□□ 0.18
CPT1AP50416 PRMT5-AS1-206ENST00000599580 847 ntTSL 5 BASIC16.16■□□□□ 0.18
CPT1AP50416 AC021016.3-201ENST00000608367 477 ntBASIC16.16■□□□□ 0.18
CPT1AP50416 AC107464.3-201ENST00000609172 737 ntBASIC16.16■□□□□ 0.18
CPT1AP50416 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
CPT1AP50416 AC090386.2-201ENST00000623010 1039 ntBASIC16.16■□□□□ 0.18
CPT1AP50416 AC005618.3-201ENST00000624928 458 ntBASIC16.16■□□□□ 0.18
CPT1AP50416 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
CPT1AP50416 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC16.16■□□□□ 0.18
CPT1AP50416 PPT1-215ENST00000641471 2368 ntBASIC16.16■□□□□ 0.18
CPT1AP50416 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
CPT1AP50416 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC16.16■□□□□ 0.18
CPT1AP50416 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC16.16■□□□□ 0.18
CPT1AP50416 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CPT1AP50416 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CPT1AP50416 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CPT1AP50416 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC16.16■□□□□ 0.18
CPT1AP50416 TMEM177-202ENST00000401466 1346 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
CPT1AP50416 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CPT1AP50416 MAEA-207ENST00000505177 1340 ntTSL 5 BASIC16.16■□□□□ 0.18
CPT1AP50416 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
CPT1AP50416 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC16.16■□□□□ 0.18
CPT1AP50416 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CPT1AP50416 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC16.15■□□□□ 0.18
CPT1AP50416 PARN-202ENST00000420015 2360 ntTSL 2 BASIC16.15■□□□□ 0.18
CPT1AP50416 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CPT1AP50416 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CPT1AP50416 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
CPT1AP50416 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
CPT1AP50416 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CPT1AP50416 CICP6-201ENST00000457191 2729 ntBASIC16.15■□□□□ 0.18
CPT1AP50416 LINC00554-201ENST00000564841 3011 ntBASIC16.15■□□□□ 0.18
CPT1AP50416 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
CPT1AP50416 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CPT1AP50416 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CPT1AP50416 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CPT1AP50416 CYP51A1P3-201ENST00000400072 1428 ntBASIC16.15■□□□□ 0.18
CPT1AP50416 AC073869.2-201ENST00000417338 1026 ntBASIC16.15■□□□□ 0.18
CPT1AP50416 AC092580.1-201ENST00000433998 658 ntBASIC16.15■□□□□ 0.18
CPT1AP50416 AC012362.1-201ENST00000434906 739 ntBASIC16.15■□□□□ 0.18
CPT1AP50416 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC16.15■□□□□ 0.18
CPT1AP50416 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC16.15■□□□□ 0.18
CPT1AP50416 AC092638.2-201ENST00000441105 947 ntBASIC16.15■□□□□ 0.18
CPT1AP50416 RPP40-203ENST00000464646 1042 ntTSL 5 BASIC16.15■□□□□ 0.18
CPT1AP50416 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC16.15■□□□□ 0.18
CPT1AP50416 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC16.15■□□□□ 0.18
CPT1AP50416 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CPT1AP50416 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC16.15■□□□□ 0.18
CPT1AP50416 AC073911.3-201ENST00000624401 631 ntBASIC16.15■□□□□ 0.18
CPT1AP50416 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC16.15■□□□□ 0.18
CPT1AP50416 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CPT1AP50416 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC16.15■□□□□ 0.18
CPT1AP50416 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC16.15■□□□□ 0.18
CPT1AP50416 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC16.15■□□□□ 0.18
CPT1AP50416 MANEAL-201ENST00000329006 1930 ntTSL 2 BASIC16.15■□□□□ 0.18
CPT1AP50416 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
CPT1AP50416 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.18
CPT1AP50416 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
CPT1AP50416 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
CPT1AP50416 MIR22HG-201ENST00000334146 1383 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CPT1AP50416 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CPT1AP50416 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
CPT1AP50416 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
CPT1AP50416 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CPT1AP50416 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC16.14■□□□□ 0.17
CPT1AP50416 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CPT1AP50416 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CPT1AP50416 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CPT1AP50416 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CPT1AP50416 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
CPT1AP50416 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC16.14■□□□□ 0.17
CPT1AP50416 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CPT1AP50416 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CPT1AP50416 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC16.14■□□□□ 0.17
CPT1AP50416 AL354861.1-201ENST00000445213 355 ntBASIC16.14■□□□□ 0.17
CPT1AP50416 TMCO5B-205ENST00000530020 894 ntBASIC16.14■□□□□ 0.17
CPT1AP50416 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC16.14■□□□□ 0.17
CPT1AP50416 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC16.14■□□□□ 0.17
CPT1AP50416 RN7SL470P-201ENST00000583069 259 ntBASIC16.14■□□□□ 0.17
CPT1AP50416 PLIN5-202ENST00000586133 907 ntTSL 3 BASIC16.14■□□□□ 0.17
CPT1AP50416 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC16.14■□□□□ 0.17
CPT1AP50416 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC16.14■□□□□ 0.17
CPT1AP50416 CR589904.1-202ENST00000611154 660 ntTSL 5 BASIC16.14■□□□□ 0.17
CPT1AP50416 AL161773.1-201ENST00000624845 863 ntBASIC16.14■□□□□ 0.17
CPT1AP50416 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC16.14■□□□□ 0.17
CPT1AP50416 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CPT1AP50416 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CPT1AP50416 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CPT1AP50416 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CPT1AP50416 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC16.14■□□□□ 0.17
CPT1AP50416 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CPT1AP50416 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CPT1AP50416 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms