Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC13.34□□□□□ -0.27
APOBEC1P41238 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC13.34□□□□□ -0.27
APOBEC1P41238 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
APOBEC1P41238 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC13.34□□□□□ -0.27
APOBEC1P41238 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
APOBEC1P41238 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC13.34□□□□□ -0.27
APOBEC1P41238 SHC1P1-201ENST00000425230 1745 ntBASIC13.34□□□□□ -0.27
APOBEC1P41238 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC13.34□□□□□ -0.27
APOBEC1P41238 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
APOBEC1P41238 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
APOBEC1P41238 AC097359.2-201ENST00000604992 2389 ntBASIC13.34□□□□□ -0.27
APOBEC1P41238 AC009093.10-201ENST00000641956 1442 ntBASIC13.34□□□□□ -0.27
APOBEC1P41238 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
APOBEC1P41238 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
APOBEC1P41238 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
APOBEC1P41238 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC13.34□□□□□ -0.27
APOBEC1P41238 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC13.34□□□□□ -0.27
APOBEC1P41238 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
APOBEC1P41238 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC13.34□□□□□ -0.27
APOBEC1P41238 KRT223P-202ENST00000449164 1292 ntBASIC13.34□□□□□ -0.27
APOBEC1P41238 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC13.34□□□□□ -0.27
APOBEC1P41238 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC13.34□□□□□ -0.27
APOBEC1P41238 IGHV3-71-201ENST00000523324 359 ntBASIC13.34□□□□□ -0.27
APOBEC1P41238 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC13.34□□□□□ -0.27
APOBEC1P41238 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC13.34□□□□□ -0.27
APOBEC1P41238 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC13.34□□□□□ -0.27
APOBEC1P41238 AP006547.1-201ENST00000563435 692 ntBASIC13.34□□□□□ -0.27
APOBEC1P41238 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
APOBEC1P41238 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC13.34□□□□□ -0.27
APOBEC1P41238 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
APOBEC1P41238 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC13.34□□□□□ -0.27
APOBEC1P41238 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC13.34□□□□□ -0.27
APOBEC1P41238 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
APOBEC1P41238 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC13.34□□□□□ -0.27
APOBEC1P41238 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC13.34□□□□□ -0.27
APOBEC1P41238 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
APOBEC1P41238 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
APOBEC1P41238 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
APOBEC1P41238 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
APOBEC1P41238 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
APOBEC1P41238 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC13.34□□□□□ -0.27
APOBEC1P41238 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
APOBEC1P41238 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.27
APOBEC1P41238 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
APOBEC1P41238 AC005089.1-201ENST00000619486 2241 ntBASIC13.33□□□□□ -0.27
APOBEC1P41238 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
APOBEC1P41238 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
APOBEC1P41238 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
APOBEC1P41238 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
APOBEC1P41238 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
APOBEC1P41238 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC13.33□□□□□ -0.27
APOBEC1P41238 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC13.33□□□□□ -0.28
APOBEC1P41238 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
APOBEC1P41238 CICP4-201ENST00000447359 2812 ntBASIC13.33□□□□□ -0.28
APOBEC1P41238 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
APOBEC1P41238 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
APOBEC1P41238 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
APOBEC1P41238 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
APOBEC1P41238 OR8S1-201ENST00000310194 1080 ntBASIC13.33□□□□□ -0.28
APOBEC1P41238 RBM38-204ENST00000371219 760 ntTSL 2 BASIC13.33□□□□□ -0.28
APOBEC1P41238 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
APOBEC1P41238 AC099336.1-201ENST00000417053 1171 ntBASIC13.33□□□□□ -0.28
APOBEC1P41238 AC079178.1-201ENST00000420915 656 ntBASIC13.33□□□□□ -0.28
APOBEC1P41238 FAM21FP-201ENST00000426241 1131 ntBASIC13.33□□□□□ -0.28
APOBEC1P41238 SKA2-202ENST00000437036 625 ntTSL 2 BASIC13.33□□□□□ -0.28
APOBEC1P41238 CICP12-201ENST00000455801 843 ntBASIC13.33□□□□□ -0.28
APOBEC1P41238 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
APOBEC1P41238 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
APOBEC1P41238 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC13.33□□□□□ -0.28
APOBEC1P41238 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC13.33□□□□□ -0.28
APOBEC1P41238 HNRNPA1P48-202ENST00000565308 961 ntBASIC13.33□□□□□ -0.28
APOBEC1P41238 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
APOBEC1P41238 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC13.33□□□□□ -0.28
APOBEC1P41238 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC13.33□□□□□ -0.28
APOBEC1P41238 AC244157.2-201ENST00000616239 1006 ntBASIC13.33□□□□□ -0.28
APOBEC1P41238 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC13.33□□□□□ -0.28
APOBEC1P41238 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC13.33□□□□□ -0.28
APOBEC1P41238 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC13.33□□□□□ -0.28
APOBEC1P41238 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
APOBEC1P41238 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC13.33□□□□□ -0.28
APOBEC1P41238 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
APOBEC1P41238 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
APOBEC1P41238 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
APOBEC1P41238 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
APOBEC1P41238 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
APOBEC1P41238 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
APOBEC1P41238 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
APOBEC1P41238 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC13.33□□□□□ -0.28
APOBEC1P41238 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
APOBEC1P41238 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
APOBEC1P41238 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
APOBEC1P41238 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
APOBEC1P41238 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
APOBEC1P41238 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
APOBEC1P41238 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
APOBEC1P41238 AC104581.4-201ENST00000623126 3052 ntBASIC13.33□□□□□ -0.28
APOBEC1P41238 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC13.33□□□□□ -0.28
APOBEC1P41238 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC13.33□□□□□ -0.28
APOBEC1P41238 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
APOBEC1P41238 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 62.4 ms