Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RPA3P35244 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RPA3P35244 TCAM1P-207ENST00000485295 1537 ntBASIC14.97□□□□□ -0.01
RPA3P35244 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
RPA3P35244 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RPA3P35244 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
RPA3P35244 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
RPA3P35244 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC14.96□□□□□ -0.01
RPA3P35244 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RPA3P35244 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RPA3P35244 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RPA3P35244 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
RPA3P35244 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RPA3P35244 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
RPA3P35244 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC14.96□□□□□ -0.01
RPA3P35244 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RPA3P35244 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
RPA3P35244 AL158070.2-201ENST00000623713 1621 ntBASIC14.96□□□□□ -0.01
RPA3P35244 HADH-202ENST00000403312 1752 ntTSL 5 BASIC14.96□□□□□ -0.01
RPA3P35244 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
RPA3P35244 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
RPA3P35244 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
RPA3P35244 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
RPA3P35244 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RPA3P35244 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
RPA3P35244 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
RPA3P35244 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RPA3P35244 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
RPA3P35244 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
RPA3P35244 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
RPA3P35244 SUN1-204ENST00000403868 978 ntTSL 2 BASIC14.96□□□□□ -0.01
RPA3P35244 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RPA3P35244 AC134915.1-201ENST00000426461 574 ntBASIC14.96□□□□□ -0.01
RPA3P35244 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC14.96□□□□□ -0.01
RPA3P35244 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC14.96□□□□□ -0.01
RPA3P35244 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RPA3P35244 AC092552.1-201ENST00000547243 906 ntBASIC14.96□□□□□ -0.01
RPA3P35244 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC14.96□□□□□ -0.01
RPA3P35244 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RPA3P35244 TP53TG3HP-202ENST00000569755 579 ntBASIC14.96□□□□□ -0.01
RPA3P35244 AC005562.1-201ENST00000583030 3219 ntBASIC14.96□□□□□ -0.01
RPA3P35244 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC14.96□□□□□ -0.01
RPA3P35244 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC14.96□□□□□ -0.01
RPA3P35244 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC14.96□□□□□ -0.01
RPA3P35244 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC14.96□□□□□ -0.01
RPA3P35244 AL662799.1-202ENST00000614205 422 ntBASIC14.96□□□□□ -0.01
RPA3P35244 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
RPA3P35244 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC14.96□□□□□ -0.01
RPA3P35244 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RPA3P35244 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
RPA3P35244 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RPA3P35244 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
RPA3P35244 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RPA3P35244 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RPA3P35244 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
RPA3P35244 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
RPA3P35244 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
RPA3P35244 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
RPA3P35244 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
RPA3P35244 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
RPA3P35244 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
RPA3P35244 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
RPA3P35244 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
RPA3P35244 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
RPA3P35244 INTS4P2-202ENST00000614726 2019 ntBASIC14.95□□□□□ -0.02
RPA3P35244 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RPA3P35244 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
RPA3P35244 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RPA3P35244 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RPA3P35244 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
RPA3P35244 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RPA3P35244 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
RPA3P35244 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC14.95□□□□□ -0.02
RPA3P35244 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC14.95□□□□□ -0.02
RPA3P35244 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC14.95□□□□□ -0.02
RPA3P35244 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RPA3P35244 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RPA3P35244 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RPA3P35244 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC14.95□□□□□ -0.02
RPA3P35244 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RPA3P35244 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RPA3P35244 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RPA3P35244 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC14.95□□□□□ -0.02
RPA3P35244 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC14.95□□□□□ -0.02
RPA3P35244 AC098850.1-201ENST00000419919 790 ntBASIC14.95□□□□□ -0.02
RPA3P35244 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC14.95□□□□□ -0.02
RPA3P35244 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
RPA3P35244 COQ6-210ENST00000554920 649 ntTSL 3 BASIC14.95□□□□□ -0.02
RPA3P35244 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC14.95□□□□□ -0.02
RPA3P35244 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC14.95□□□□□ -0.02
RPA3P35244 BRI3BPP1-201ENST00000594224 787 ntBASIC14.95□□□□□ -0.02
RPA3P35244 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
RPA3P35244 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC14.95□□□□□ -0.02
RPA3P35244 TMEM261P1-201ENST00000604899 340 ntBASIC14.95□□□□□ -0.02
RPA3P35244 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC14.95□□□□□ -0.02
RPA3P35244 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC14.95□□□□□ -0.02
RPA3P35244 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC14.95□□□□□ -0.02
RPA3P35244 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RPA3P35244 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RPA3P35244 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 65.4 ms