Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 APCDD1L-AS1-206ENST00000445984 566 ntTSL 3 BASIC17.89■□□□□ 0.45
TM4SF1P30408 APCDD1L-AS1-208ENST00000448374 546 ntTSL 4 BASIC17.89■□□□□ 0.45
TM4SF1P30408 RNF216P1-212ENST00000493407 659 ntTSL 3 BASIC17.89■□□□□ 0.45
TM4SF1P30408 AC008026.2-201ENST00000495438 348 ntBASIC17.89■□□□□ 0.45
TM4SF1P30408 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC17.89■□□□□ 0.45
TM4SF1P30408 AC005845.1-201ENST00000539206 653 ntTSL 3 BASIC17.89■□□□□ 0.45
TM4SF1P30408 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC17.89■□□□□ 0.45
TM4SF1P30408 AC068831.5-201ENST00000557387 328 ntBASIC17.89■□□□□ 0.45
TM4SF1P30408 AC130456.3-201ENST00000561762 633 ntTSL 3 BASIC17.89■□□□□ 0.45
TM4SF1P30408 AC012174.1-201ENST00000562349 714 ntTSL 3 BASIC17.89■□□□□ 0.45
TM4SF1P30408 COX5A-205ENST00000568517 582 ntTSL 3 BASIC17.89■□□□□ 0.45
TM4SF1P30408 AP005264.5-201ENST00000590066 467 ntBASIC17.89■□□□□ 0.45
TM4SF1P30408 NMRK2-202ENST00000593949 869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
TM4SF1P30408 MCEMP1-202ENST00000597445 763 ntAPPRIS ALT2 TSL 3 BASIC17.89■□□□□ 0.45
TM4SF1P30408 NMRK2-204ENST00000599576 691 ntTSL 3 BASIC17.89■□□□□ 0.45
TM4SF1P30408 AL009176.1-201ENST00000607876 650 ntBASIC17.89■□□□□ 0.45
TM4SF1P30408 PROX1-AS1-235ENST00000628896 711 ntTSL 5 BASIC17.89■□□□□ 0.45
TM4SF1P30408 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TM4SF1P30408 DSCAM-AS1-202ENST00000427451 1640 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TM4SF1P30408 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC17.89■□□□□ 0.45
TM4SF1P30408 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TM4SF1P30408 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TM4SF1P30408 C12orf65-204ENST00000429587 1326 ntAPPRIS P2 TSL 2 BASIC17.89■□□□□ 0.45
TM4SF1P30408 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TM4SF1P30408 PARN-202ENST00000420015 2360 ntTSL 2 BASIC17.89■□□□□ 0.45
TM4SF1P30408 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TM4SF1P30408 ASGR1-209ENST00000619926 1384 ntTSL 5 BASIC17.89■□□□□ 0.45
TM4SF1P30408 AC018442.1-201ENST00000421439 2061 ntBASIC17.89■□□□□ 0.45
TM4SF1P30408 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TM4SF1P30408 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TM4SF1P30408 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TM4SF1P30408 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
TM4SF1P30408 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TM4SF1P30408 PAIP2-201ENST00000265192 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TM4SF1P30408 SCAMP1-AS1-201ENST00000421004 1479 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TM4SF1P30408 AC004554.1-201ENST00000422830 1468 ntBASIC17.88■□□□□ 0.45
TM4SF1P30408 PHB-210ENST00000511832 1509 ntTSL 2 BASIC17.88■□□□□ 0.45
TM4SF1P30408 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
TM4SF1P30408 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
TM4SF1P30408 MX1-218ENST00000619682 1980 ntTSL 5 BASIC17.88■□□□□ 0.45
TM4SF1P30408 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TM4SF1P30408 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC17.88■□□□□ 0.45
TM4SF1P30408 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TM4SF1P30408 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TM4SF1P30408 TNNI2-201ENST00000252898 678 ntAPPRIS P3 TSL 3 BASIC17.88■□□□□ 0.45
TM4SF1P30408 TNNI2-202ENST00000381905 706 ntAPPRIS ALT1 TSL 3 BASIC17.88■□□□□ 0.45
TM4SF1P30408 TNNI2-203ENST00000381906 745 ntAPPRIS P3 TSL 3 BASIC17.88■□□□□ 0.45
TM4SF1P30408 TNNI2-204ENST00000381911 743 ntAPPRIS P3 TSL 2 BASIC17.88■□□□□ 0.45
TM4SF1P30408 OR52M2P-201ENST00000414298 959 ntBASIC17.88■□□□□ 0.45
TM4SF1P30408 EHMT2-AS1-201ENST00000434689 373 ntTSL 3 BASIC17.88■□□□□ 0.45
TM4SF1P30408 IFI35-204ENST00000438323 1232 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
TM4SF1P30408 DARS-AS1-204ENST00000444406 442 ntTSL 2 BASIC17.88■□□□□ 0.45
TM4SF1P30408 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TM4SF1P30408 ALG1L3P-201ENST00000503331 765 ntBASIC17.88■□□□□ 0.45
TM4SF1P30408 CHCHD2P2-201ENST00000503744 321 ntBASIC17.88■□□□□ 0.45
TM4SF1P30408 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC17.88■□□□□ 0.45
TM4SF1P30408 C19orf70-203ENST00000587589 577 ntTSL 5 BASIC17.88■□□□□ 0.45
TM4SF1P30408 AL627230.2-201ENST00000613254 655 ntBASIC17.88■□□□□ 0.45
TM4SF1P30408 CASP16P-204ENST00000635032 809 ntBASIC17.88■□□□□ 0.45
TM4SF1P30408 AC106774.7-201ENST00000638408 597 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
TM4SF1P30408 AC106774.6-201ENST00000638483 597 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
TM4SF1P30408 AC233724.20-201ENST00000638842 597 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
TM4SF1P30408 AC233724.19-201ENST00000639969 597 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
TM4SF1P30408 AC106774.5-201ENST00000640558 597 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
TM4SF1P30408 AC233724.18-201ENST00000640803 597 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
TM4SF1P30408 AC233724.21-201ENST00000640846 597 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
TM4SF1P30408 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
TM4SF1P30408 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
TM4SF1P30408 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC17.88■□□□□ 0.45
TM4SF1P30408 DHRS7-209ENST00000557185 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TM4SF1P30408 UBOX5-AS1-201ENST00000446537 1792 ntTSL 2 BASIC17.88■□□□□ 0.45
TM4SF1P30408 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TM4SF1P30408 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC17.88■□□□□ 0.45
TM4SF1P30408 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
TM4SF1P30408 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC17.88■□□□□ 0.45
TM4SF1P30408 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
TM4SF1P30408 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TM4SF1P30408 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC17.88■□□□□ 0.45
TM4SF1P30408 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC17.88■□□□□ 0.45
TM4SF1P30408 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC17.88■□□□□ 0.45
TM4SF1P30408 SPAAR-203ENST00000636776 1538 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
TM4SF1P30408 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
TM4SF1P30408 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
TM4SF1P30408 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TM4SF1P30408 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TM4SF1P30408 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
TM4SF1P30408 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC17.87■□□□□ 0.45
TM4SF1P30408 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC17.87■□□□□ 0.45
TM4SF1P30408 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
TM4SF1P30408 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TM4SF1P30408 CCT8L1P-201ENST00000465400 1674 ntBASIC17.87■□□□□ 0.45
TM4SF1P30408 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TM4SF1P30408 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TM4SF1P30408 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC17.87■□□□□ 0.45
TM4SF1P30408 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TM4SF1P30408 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
TM4SF1P30408 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
TM4SF1P30408 PRELID3B-202ENST00000371033 943 ntTSL 2 BASIC17.87■□□□□ 0.45
TM4SF1P30408 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
TM4SF1P30408 LINC01523-201ENST00000425385 450 ntTSL 2 BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms