Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC15.51■□□□□ 0.07
RARAP10276 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC15.51■□□□□ 0.07
RARAP10276 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
RARAP10276 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RARAP10276 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
RARAP10276 GSN-209ENST00000449733 2702 ntTSL 2 BASIC15.51■□□□□ 0.07
RARAP10276 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
RARAP10276 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC15.51■□□□□ 0.07
RARAP10276 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RARAP10276 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
RARAP10276 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RARAP10276 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
RARAP10276 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RARAP10276 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RARAP10276 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
RARAP10276 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
RARAP10276 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
RARAP10276 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC15.5■□□□□ 0.07
RARAP10276 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC15.5■□□□□ 0.07
RARAP10276 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RARAP10276 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
RARAP10276 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RARAP10276 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
RARAP10276 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC15.5■□□□□ 0.07
RARAP10276 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
RARAP10276 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
RARAP10276 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RARAP10276 AC005229.1-201ENST00000392885 409 ntBASIC15.5■□□□□ 0.07
RARAP10276 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC15.5■□□□□ 0.07
RARAP10276 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RARAP10276 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC15.5■□□□□ 0.07
RARAP10276 AL355864.2-201ENST00000447420 863 ntBASIC15.5■□□□□ 0.07
RARAP10276 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC15.5■□□□□ 0.07
RARAP10276 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC15.5■□□□□ 0.07
RARAP10276 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC15.5■□□□□ 0.07
RARAP10276 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC15.5■□□□□ 0.07
RARAP10276 AC025279.2-201ENST00000569730 653 ntBASIC15.5■□□□□ 0.07
RARAP10276 PIGL-212ENST00000581006 554 ntTSL 4 BASIC15.5■□□□□ 0.07
RARAP10276 MIR3197-201ENST00000582241 73 ntBASIC15.5■□□□□ 0.07
RARAP10276 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC15.5■□□□□ 0.07
RARAP10276 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC15.5■□□□□ 0.07
RARAP10276 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
RARAP10276 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RARAP10276 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
RARAP10276 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
RARAP10276 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
RARAP10276 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
RARAP10276 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
RARAP10276 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RARAP10276 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC15.5■□□□□ 0.07
RARAP10276 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC15.5■□□□□ 0.07
RARAP10276 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC15.5■□□□□ 0.07
RARAP10276 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RARAP10276 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RARAP10276 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
RARAP10276 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RARAP10276 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
RARAP10276 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC15.49■□□□□ 0.07
RARAP10276 AC027612.1-201ENST00000445234 2395 ntBASIC15.49■□□□□ 0.07
RARAP10276 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
RARAP10276 MRPL37P1-201ENST00000592451 1337 ntBASIC15.49■□□□□ 0.07
RARAP10276 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RARAP10276 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC15.49■□□□□ 0.07
RARAP10276 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
RARAP10276 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RARAP10276 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RARAP10276 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RARAP10276 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
RARAP10276 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
RARAP10276 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC15.49■□□□□ 0.07
RARAP10276 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC15.49■□□□□ 0.07
RARAP10276 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
RARAP10276 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RARAP10276 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RARAP10276 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RARAP10276 AC092933.1-201ENST00000393644 945 ntBASIC15.49■□□□□ 0.07
RARAP10276 TMEM14DP-201ENST00000422205 345 ntBASIC15.49■□□□□ 0.07
RARAP10276 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
RARAP10276 AL391280.1-201ENST00000506969 1062 ntBASIC15.49■□□□□ 0.07
RARAP10276 GCOM2-201ENST00000509133 1104 ntBASIC15.49■□□□□ 0.07
RARAP10276 FUZ-207ENST00000526575 482 ntTSL 4 BASIC15.49■□□□□ 0.07
RARAP10276 AC015936.2-201ENST00000593177 259 ntBASIC15.49■□□□□ 0.07
RARAP10276 AC008735.3-201ENST00000596646 500 ntBASIC15.49■□□□□ 0.07
RARAP10276 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC15.49■□□□□ 0.07
RARAP10276 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC15.49■□□□□ 0.07
RARAP10276 AC132938.4-201ENST00000623835 848 ntBASIC15.49■□□□□ 0.07
RARAP10276 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC15.49■□□□□ 0.07
RARAP10276 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC15.49■□□□□ 0.07
RARAP10276 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC15.49■□□□□ 0.07
RARAP10276 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC15.49■□□□□ 0.07
RARAP10276 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
RARAP10276 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RARAP10276 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC15.49■□□□□ 0.07
RARAP10276 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC15.49■□□□□ 0.07
RARAP10276 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RARAP10276 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
RARAP10276 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RARAP10276 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RARAP10276 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RARAP10276 FKBP4P6-201ENST00000457486 1332 ntBASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 68.3 ms