Protein–RNA interactions for Protein: P0DL12

SMIM17, Small integral membrane protein 17, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM17P0DL12 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
SMIM17P0DL12 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC11.09□□□□□ -0.63
SMIM17P0DL12 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
SMIM17P0DL12 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC11.09□□□□□ -0.63
SMIM17P0DL12 SPDYE17-201ENST00000412399 783 ntBASIC11.09□□□□□ -0.63
SMIM17P0DL12 SYS1-203ENST00000414310 795 ntTSL 3 BASIC11.09□□□□□ -0.63
SMIM17P0DL12 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC11.09□□□□□ -0.63
SMIM17P0DL12 ADH5P3-201ENST00000433842 1137 ntBASIC11.09□□□□□ -0.63
SMIM17P0DL12 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC11.09□□□□□ -0.63
SMIM17P0DL12 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
SMIM17P0DL12 AC009078.2-202ENST00000463353 338 ntBASIC11.09□□□□□ -0.63
SMIM17P0DL12 PTK7-212ENST00000476760 902 ntTSL 2 BASIC11.09□□□□□ -0.63
SMIM17P0DL12 AC069335.1-201ENST00000489972 472 ntBASIC11.09□□□□□ -0.63
SMIM17P0DL12 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC11.09□□□□□ -0.63
SMIM17P0DL12 AC040169.1-201ENST00000565382 521 ntBASIC11.09□□□□□ -0.63
SMIM17P0DL12 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC11.09□□□□□ -0.63
SMIM17P0DL12 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
SMIM17P0DL12 UBL5-208ENST00000593087 320 ntTSL 3 BASIC11.09□□□□□ -0.63
SMIM17P0DL12 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC11.09□□□□□ -0.63
SMIM17P0DL12 GREB1-201ENST00000234142 8444 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SMIM17P0DL12 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
SMIM17P0DL12 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
SMIM17P0DL12 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SMIM17P0DL12 ZEB2-246ENST00000638128 8932 ntTSL 5 BASIC11.09□□□□□ -0.63
SMIM17P0DL12 NBPF12-208ENST00000617931 7061 ntAPPRIS P2 TSL 5 BASIC11.09□□□□□ -0.63
SMIM17P0DL12 PPFIA4-201ENST00000272198 5045 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
SMIM17P0DL12 FES-203ENST00000394302 2133 ntTSL 5 BASIC11.09□□□□□ -0.63
SMIM17P0DL12 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
SMIM17P0DL12 PNMA5-205ENST00000535214 3198 ntAPPRIS P2 TSL 3 BASIC11.09□□□□□ -0.63
SMIM17P0DL12 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
SMIM17P0DL12 SULF1-202ENST00000402687 4891 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SMIM17P0DL12 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
SMIM17P0DL12 TRUB2-201ENST00000372890 5719 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SMIM17P0DL12 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC11.09□□□□□ -0.63
SMIM17P0DL12 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
SMIM17P0DL12 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
SMIM17P0DL12 AC015802.1-201ENST00000588104 1449 ntBASIC11.09□□□□□ -0.63
SMIM17P0DL12 TIAM1-206ENST00000541036 7018 ntTSL 5 BASIC11.09□□□□□ -0.63
SMIM17P0DL12 ELN-211ENST00000414324 3139 ntAPPRIS ALT2 TSL 2 BASIC11.09□□□□□ -0.63
SMIM17P0DL12 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC11.08□□□□□ -0.63
SMIM17P0DL12 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.63
SMIM17P0DL12 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
SMIM17P0DL12 MYRF-201ENST00000265460 5745 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
SMIM17P0DL12 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
SMIM17P0DL12 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC11.08□□□□□ -0.64
SMIM17P0DL12 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
SMIM17P0DL12 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
SMIM17P0DL12 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC11.08□□□□□ -0.64
SMIM17P0DL12 FAM95B1-212ENST00000592873 4692 ntBASIC11.08□□□□□ -0.64
SMIM17P0DL12 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC11.08□□□□□ -0.64
SMIM17P0DL12 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
SMIM17P0DL12 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
SMIM17P0DL12 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
SMIM17P0DL12 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
SMIM17P0DL12 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
SMIM17P0DL12 ZNF646-201ENST00000300850 6892 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
SMIM17P0DL12 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
SMIM17P0DL12 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC11.08□□□□□ -0.64
SMIM17P0DL12 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
SMIM17P0DL12 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC11.08□□□□□ -0.64
SMIM17P0DL12 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
SMIM17P0DL12 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
SMIM17P0DL12 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
SMIM17P0DL12 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
SMIM17P0DL12 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
SMIM17P0DL12 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
SMIM17P0DL12 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
SMIM17P0DL12 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
SMIM17P0DL12 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
SMIM17P0DL12 KRT126P-201ENST00000549467 1181 ntBASIC11.08□□□□□ -0.64
SMIM17P0DL12 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC11.08□□□□□ -0.64
SMIM17P0DL12 PIN1-206ENST00000587625 878 ntTSL 2 BASIC11.08□□□□□ -0.64
SMIM17P0DL12 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
SMIM17P0DL12 AC025181.2-201ENST00000606994 802 ntBASIC11.08□□□□□ -0.64
SMIM17P0DL12 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC11.08□□□□□ -0.64
SMIM17P0DL12 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
SMIM17P0DL12 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC11.08□□□□□ -0.64
SMIM17P0DL12 AC084121.4-201ENST00000641598 221 ntBASIC11.08□□□□□ -0.64
SMIM17P0DL12 AF228730.8-201ENST00000642140 221 ntBASIC11.08□□□□□ -0.64
SMIM17P0DL12 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC11.08□□□□□ -0.64
SMIM17P0DL12 MFSD8-241ENST00000641686 4991 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
SMIM17P0DL12 DYNC1LI1-201ENST00000273130 2504 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
SMIM17P0DL12 MAMDC4-202ENST00000445819 3895 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
SMIM17P0DL12 PTPRG-201ENST00000295874 4650 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
SMIM17P0DL12 AC106818.1-201ENST00000623223 3242 ntBASIC11.08□□□□□ -0.64
SMIM17P0DL12 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
SMIM17P0DL12 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
SMIM17P0DL12 VAMP4-201ENST00000236192 5159 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
SMIM17P0DL12 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
SMIM17P0DL12 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
SMIM17P0DL12 MTHFR-202ENST00000376583 7044 ntAPPRIS ALT1 TSL 5 BASIC11.08□□□□□ -0.64
SMIM17P0DL12 FURIN-206ENST00000610579 4191 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
SMIM17P0DL12 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
SMIM17P0DL12 PANK3-201ENST00000239231 10506 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
SMIM17P0DL12 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC11.08□□□□□ -0.64
SMIM17P0DL12 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC11.08□□□□□ -0.64
SMIM17P0DL12 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
SMIM17P0DL12 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC11.08□□□□□ -0.64
SMIM17P0DL12 AC083964.2-201ENST00000623988 2396 ntBASIC11.08□□□□□ -0.64
SMIM17P0DL12 STAG3-206ENST00000426455 4450 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms