Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
P04436 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
P04436 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
P04436 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
P04436 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
P04436 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC13.46□□□□□ -0.25
P04436 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
P04436 AC144831.1-201ENST00000573312 2656 ntBASIC13.46□□□□□ -0.25
P04436 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC13.46□□□□□ -0.25
P04436 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
P04436 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
P04436 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC13.46□□□□□ -0.25
P04436 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
P04436 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
P04436 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC13.46□□□□□ -0.25
P04436 BX284668.4-201ENST00000453917 508 ntBASIC13.46□□□□□ -0.25
P04436 OARD1-204ENST00000464633 717 ntTSL 2 BASIC13.46□□□□□ -0.25
P04436 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
P04436 RPL18P13-201ENST00000478088 569 ntBASIC13.46□□□□□ -0.25
P04436 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC13.46□□□□□ -0.25
P04436 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC13.46□□□□□ -0.25
P04436 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC13.46□□□□□ -0.25
P04436 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC13.46□□□□□ -0.25
P04436 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC13.46□□□□□ -0.25
P04436 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
P04436 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC13.46□□□□□ -0.25
P04436 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC13.46□□□□□ -0.25
P04436 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
P04436 NDUFV2P1-201ENST00000596415 907 ntBASIC13.46□□□□□ -0.25
P04436 AC090164.2-201ENST00000611487 516 ntBASIC13.46□□□□□ -0.25
P04436 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
P04436 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
P04436 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
P04436 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC13.46□□□□□ -0.25
P04436 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC13.46□□□□□ -0.25
P04436 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
P04436 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
P04436 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
P04436 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
P04436 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC13.46□□□□□ -0.26
P04436 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
P04436 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC13.46□□□□□ -0.26
P04436 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
P04436 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
P04436 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC13.46□□□□□ -0.26
P04436 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.26
P04436 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
P04436 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC13.46□□□□□ -0.26
P04436 AC013726.1-201ENST00000563747 2285 ntBASIC13.46□□□□□ -0.26
P04436 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
P04436 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
P04436 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
P04436 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
P04436 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
P04436 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
P04436 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
P04436 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC13.45□□□□□ -0.26
P04436 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
P04436 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
P04436 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
P04436 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
P04436 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC13.45□□□□□ -0.26
P04436 MYB-242ENST00000618728 3545 ntTSL 5 BASIC13.45□□□□□ -0.26
P04436 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC13.45□□□□□ -0.26
P04436 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
P04436 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
P04436 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC13.45□□□□□ -0.26
P04436 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
P04436 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
P04436 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
P04436 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
P04436 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
P04436 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
P04436 HNRNPA1P27-201ENST00000412087 955 ntBASIC13.45□□□□□ -0.26
P04436 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC13.45□□□□□ -0.26
P04436 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC13.45□□□□□ -0.26
P04436 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC13.45□□□□□ -0.26
P04436 AC104073.2-201ENST00000453737 312 ntBASIC13.45□□□□□ -0.26
P04436 RBM8B-201ENST00000555532 525 ntBASIC13.45□□□□□ -0.26
P04436 AC005962.1-201ENST00000584100 773 ntBASIC13.45□□□□□ -0.26
P04436 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC13.45□□□□□ -0.26
P04436 AC091544.8-201ENST00000619490 361 ntBASIC13.45□□□□□ -0.26
P04436 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
P04436 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
P04436 PCBP2-OT1-201ENST00000634357 590 ntBASIC13.45□□□□□ -0.26
P04436 AL139099.5-201ENST00000635274 300 ntBASIC13.45□□□□□ -0.26
P04436 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
P04436 AC068587.8-201ENST00000641239 219 ntBASIC13.45□□□□□ -0.26
P04436 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
P04436 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
P04436 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC13.45□□□□□ -0.26
P04436 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
P04436 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC13.45□□□□□ -0.26
P04436 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
P04436 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC13.45□□□□□ -0.26
P04436 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
P04436 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
P04436 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC13.45□□□□□ -0.26
P04436 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
P04436 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC13.45□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms