Protein–RNA interactions for Protein: O95602

POLR1A, DNA-directed RNA polymerase I subunit RPA1, humanhuman

Predicted RBP Predictions only

Length 1,720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1AO95602 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
POLR1AO95602 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC20.84■□□□□ 0.93
POLR1AO95602 HLA-DRB5-201ENST00000374975 1260 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
POLR1AO95602 CFAP36-203ENST00000403007 759 ntTSL 2 BASIC20.84■□□□□ 0.93
POLR1AO95602 ID2-AS1-201ENST00000412712 953 ntTSL 5 BASIC20.84■□□□□ 0.93
POLR1AO95602 NAA60-205ENST00000424546 1149 ntTSL 2 BASIC20.84■□□□□ 0.93
POLR1AO95602 AC063952.3-201ENST00000467756 308 ntBASIC20.84■□□□□ 0.93
POLR1AO95602 NMNAT3-213ENST00000512391 794 ntTSL 3 BASIC20.84■□□□□ 0.93
POLR1AO95602 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC20.84■□□□□ 0.93
POLR1AO95602 GSTZ1-210ENST00000554279 795 ntTSL 2 BASIC20.84■□□□□ 0.93
POLR1AO95602 AC008735.2-201ENST00000589456 549 ntTSL 5 BASIC20.84■□□□□ 0.93
POLR1AO95602 APOBEC3H-207ENST00000613996 465 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
POLR1AO95602 DNAJC10-211ENST00000640034 888 ntTSL 5 BASIC20.84■□□□□ 0.93
POLR1AO95602 DBET-201ENST00000630918 3363 ntBASIC20.84■□□□□ 0.93
POLR1AO95602 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
POLR1AO95602 GOLGA8VP-201ENST00000559009 1798 ntBASIC20.83■□□□□ 0.93
POLR1AO95602 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
POLR1AO95602 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC20.83■□□□□ 0.93
POLR1AO95602 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC20.83■□□□□ 0.93
POLR1AO95602 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC20.83■□□□□ 0.93
POLR1AO95602 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
POLR1AO95602 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC20.83■□□□□ 0.93
POLR1AO95602 AC113367.3-201ENST00000508316 1912 ntBASIC20.83■□□□□ 0.93
POLR1AO95602 AC005912.2-201ENST00000619492 2400 ntBASIC20.83■□□□□ 0.93
POLR1AO95602 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
POLR1AO95602 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
POLR1AO95602 ZNF614-202ENST00000356322 1293 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
POLR1AO95602 CHTF8-202ENST00000398235 1073 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
POLR1AO95602 AC018814.1-201ENST00000418972 357 ntTSL 3 BASIC20.83■□□□□ 0.92
POLR1AO95602 HLA-DPA2-205ENST00000433582 733 ntBASIC20.83■□□□□ 0.92
POLR1AO95602 AL451000.1-201ENST00000451300 1186 ntBASIC20.83■□□□□ 0.92
POLR1AO95602 GNG10P1-201ENST00000452289 199 ntBASIC20.83■□□□□ 0.92
POLR1AO95602 CD164-210ENST00000512821 964 ntTSL 2 BASIC20.83■□□□□ 0.92
POLR1AO95602 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
POLR1AO95602 PMEL-214ENST00000550447 901 ntTSL 3 BASIC20.83■□□□□ 0.92
POLR1AO95602 MT2A-202ENST00000561491 581 ntTSL 2 BASIC20.83■□□□□ 0.92
POLR1AO95602 KRT17P4-206ENST00000584151 719 ntTSL 4 BASIC20.83■□□□□ 0.92
POLR1AO95602 ARRB2-218ENST00000575877 1579 ntTSL 5 BASIC20.83■□□□□ 0.92
POLR1AO95602 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
POLR1AO95602 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
POLR1AO95602 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
POLR1AO95602 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
POLR1AO95602 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
POLR1AO95602 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
POLR1AO95602 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC20.83■□□□□ 0.92
POLR1AO95602 TEKT4P2-202ENST00000559466 1312 ntBASIC20.83■□□□□ 0.92
POLR1AO95602 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
POLR1AO95602 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC20.82■□□□□ 0.92
POLR1AO95602 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
POLR1AO95602 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC20.82■□□□□ 0.92
POLR1AO95602 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
POLR1AO95602 ANKRD26P3-201ENST00000454044 2748 ntBASIC20.82■□□□□ 0.92
POLR1AO95602 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
POLR1AO95602 DEPDC1-AS1-201ENST00000428732 1247 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
POLR1AO95602 ST13P19-201ENST00000442505 1124 ntBASIC20.82■□□□□ 0.92
POLR1AO95602 AC128689.1-202ENST00000459861 827 ntTSL 3 BASIC20.82■□□□□ 0.92
POLR1AO95602 AADACL2-AS1-202ENST00000483843 628 ntTSL 5 BASIC20.82■□□□□ 0.92
POLR1AO95602 RN7SL582P-201ENST00000491078 279 ntBASIC20.82■□□□□ 0.92
POLR1AO95602 AL928742.1-201ENST00000497397 548 ntTSL 4 BASIC20.82■□□□□ 0.92
POLR1AO95602 C10orf113-201ENST00000529198 614 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
POLR1AO95602 YPEL4-209ENST00000534711 889 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
POLR1AO95602 AC007250.1-201ENST00000608934 338 ntBASIC20.82■□□□□ 0.92
POLR1AO95602 BLACE-202ENST00000616210 540 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
POLR1AO95602 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC20.82■□□□□ 0.92
POLR1AO95602 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
POLR1AO95602 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC20.82■□□□□ 0.92
POLR1AO95602 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
POLR1AO95602 AC021305.1-201ENST00000520656 1514 ntBASIC20.82■□□□□ 0.92
POLR1AO95602 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
POLR1AO95602 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
POLR1AO95602 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
POLR1AO95602 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
POLR1AO95602 RPL18AP8-201ENST00000486071 528 ntBASIC20.81■□□□□ 0.92
POLR1AO95602 GDNF-207ENST00000515058 764 ntTSL 5 BASIC20.81■□□□□ 0.92
POLR1AO95602 F11R-204ENST00000537746 1245 ntTSL 2 BASIC20.81■□□□□ 0.92
POLR1AO95602 AC079949.1-201ENST00000541419 505 ntTSL 3 BASIC20.81■□□□□ 0.92
POLR1AO95602 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC20.81■□□□□ 0.92
POLR1AO95602 TXNDC9-201ENST00000264255 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
POLR1AO95602 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
POLR1AO95602 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC20.81■□□□□ 0.92
POLR1AO95602 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
POLR1AO95602 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
POLR1AO95602 FAM227B-212ENST00000561064 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
POLR1AO95602 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
POLR1AO95602 GSN-203ENST00000373808 2664 ntTSL 2 BASIC20.81■□□□□ 0.92
POLR1AO95602 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
POLR1AO95602 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
POLR1AO95602 EFHD1-207ENST00000611312 1490 ntTSL 5 BASIC20.81■□□□□ 0.92
POLR1AO95602 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC20.81■□□□□ 0.92
POLR1AO95602 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
POLR1AO95602 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
POLR1AO95602 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC20.81■□□□□ 0.92
POLR1AO95602 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC20.81■□□□□ 0.92
POLR1AO95602 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
POLR1AO95602 TNNT3-201ENST00000278317 1210 ntAPPRIS P3 TSL 5 BASIC20.81■□□□□ 0.92
POLR1AO95602 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
POLR1AO95602 TNNT3-207ENST00000381589 1060 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
POLR1AO95602 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC20.81■□□□□ 0.92
POLR1AO95602 LINC01022-201ENST00000415652 394 ntTSL 3 BASIC20.81■□□□□ 0.92
POLR1AO95602 SNX3-204ENST00000426155 1072 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms