Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
GPC4O75487 AC134312.5-201ENST00000568031 1313 ntBASIC14.88□□□□□ -0.03
GPC4O75487 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC14.88□□□□□ -0.03
GPC4O75487 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
GPC4O75487 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
GPC4O75487 HSPA7-201ENST00000445535 1927 ntBASIC14.88□□□□□ -0.03
GPC4O75487 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
GPC4O75487 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC14.88□□□□□ -0.03
GPC4O75487 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC14.88□□□□□ -0.03
GPC4O75487 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
GPC4O75487 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
GPC4O75487 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC14.88□□□□□ -0.03
GPC4O75487 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
GPC4O75487 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
GPC4O75487 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
GPC4O75487 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
GPC4O75487 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
GPC4O75487 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC14.87□□□□□ -0.03
GPC4O75487 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
GPC4O75487 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
GPC4O75487 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
GPC4O75487 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
GPC4O75487 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
GPC4O75487 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
GPC4O75487 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC14.87□□□□□ -0.03
GPC4O75487 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC14.87□□□□□ -0.03
GPC4O75487 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC14.87□□□□□ -0.03
GPC4O75487 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
GPC4O75487 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
GPC4O75487 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
GPC4O75487 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
GPC4O75487 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
GPC4O75487 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
GPC4O75487 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
GPC4O75487 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC14.87□□□□□ -0.03
GPC4O75487 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC14.87□□□□□ -0.03
GPC4O75487 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC14.87□□□□□ -0.03
GPC4O75487 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC14.87□□□□□ -0.03
GPC4O75487 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
GPC4O75487 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC14.87□□□□□ -0.03
GPC4O75487 TKT-201ENST00000296289 1931 ntTSL 5 BASIC14.87□□□□□ -0.03
GPC4O75487 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
GPC4O75487 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC14.87□□□□□ -0.03
GPC4O75487 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC14.87□□□□□ -0.03
GPC4O75487 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
GPC4O75487 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
GPC4O75487 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC14.87□□□□□ -0.03
GPC4O75487 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC14.87□□□□□ -0.03
GPC4O75487 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
GPC4O75487 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
GPC4O75487 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
GPC4O75487 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
GPC4O75487 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
GPC4O75487 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
GPC4O75487 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
GPC4O75487 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC14.86□□□□□ -0.03
GPC4O75487 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
GPC4O75487 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
GPC4O75487 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
GPC4O75487 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC14.86□□□□□ -0.03
GPC4O75487 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
GPC4O75487 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
GPC4O75487 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
GPC4O75487 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
GPC4O75487 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
GPC4O75487 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
GPC4O75487 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
GPC4O75487 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
GPC4O75487 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC14.86□□□□□ -0.03
GPC4O75487 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC14.86□□□□□ -0.03
GPC4O75487 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
GPC4O75487 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC14.86□□□□□ -0.03
GPC4O75487 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
GPC4O75487 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
GPC4O75487 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
GPC4O75487 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC14.86□□□□□ -0.03
GPC4O75487 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
GPC4O75487 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
GPC4O75487 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
GPC4O75487 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
GPC4O75487 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC14.86□□□□□ -0.03
GPC4O75487 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
GPC4O75487 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
GPC4O75487 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC14.86□□□□□ -0.03
GPC4O75487 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
GPC4O75487 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC14.86□□□□□ -0.03
GPC4O75487 USP32P1-208ENST00000506594 1164 ntBASIC14.86□□□□□ -0.03
GPC4O75487 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC14.86□□□□□ -0.03
GPC4O75487 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC14.86□□□□□ -0.03
GPC4O75487 AP001889.1-201ENST00000525414 633 ntBASIC14.86□□□□□ -0.03
GPC4O75487 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
GPC4O75487 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC14.86□□□□□ -0.03
GPC4O75487 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC14.86□□□□□ -0.03
GPC4O75487 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC14.86□□□□□ -0.03
GPC4O75487 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC14.86□□□□□ -0.03
GPC4O75487 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
GPC4O75487 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC14.86□□□□□ -0.03
GPC4O75487 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
GPC4O75487 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
GPC4O75487 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 59.6 ms