Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC12.1□□□□□ -0.47
SSSCA1O60232 IL9RP2-201ENST00000423948 1312 ntBASIC12.1□□□□□ -0.47
SSSCA1O60232 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
SSSCA1O60232 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
SSSCA1O60232 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SSSCA1O60232 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC12.09□□□□□ -0.47
SSSCA1O60232 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC12.09□□□□□ -0.47
SSSCA1O60232 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC12.09□□□□□ -0.47
SSSCA1O60232 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SSSCA1O60232 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC12.09□□□□□ -0.47
SSSCA1O60232 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC12.09□□□□□ -0.47
SSSCA1O60232 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
SSSCA1O60232 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
SSSCA1O60232 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC12.09□□□□□ -0.47
SSSCA1O60232 SH3PXD2B-201ENST00000311601 7777 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SSSCA1O60232 NPC1-201ENST00000269228 5157 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SSSCA1O60232 AC104129.1-202ENST00000480694 4481 ntTSL 2 BASIC12.09□□□□□ -0.47
SSSCA1O60232 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SSSCA1O60232 MYLK-202ENST00000354792 7531 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
SSSCA1O60232 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
SSSCA1O60232 MYO9B-204ENST00000594824 7595 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
SSSCA1O60232 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SSSCA1O60232 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SSSCA1O60232 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
SSSCA1O60232 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SSSCA1O60232 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
SSSCA1O60232 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
SSSCA1O60232 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
SSSCA1O60232 AL450487.1-201ENST00000426799 995 ntBASIC12.09□□□□□ -0.47
SSSCA1O60232 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC12.09□□□□□ -0.47
SSSCA1O60232 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC12.09□□□□□ -0.47
SSSCA1O60232 MYADML-201ENST00000474610 2147 ntBASIC12.09□□□□□ -0.47
SSSCA1O60232 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
SSSCA1O60232 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC12.09□□□□□ -0.47
SSSCA1O60232 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
SSSCA1O60232 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC12.09□□□□□ -0.47
SSSCA1O60232 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC12.09□□□□□ -0.47
SSSCA1O60232 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC12.09□□□□□ -0.47
SSSCA1O60232 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC12.09□□□□□ -0.47
SSSCA1O60232 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SSSCA1O60232 TRAF3-208ENST00000560371 7640 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SSSCA1O60232 CEP68-202ENST00000377990 5847 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
SSSCA1O60232 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC12.09□□□□□ -0.47
SSSCA1O60232 DSTN-201ENST00000246069 3617 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SSSCA1O60232 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
SSSCA1O60232 PEAR1-201ENST00000292357 4866 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
SSSCA1O60232 KRT8P14-201ENST00000414254 1442 ntBASIC12.09□□□□□ -0.47
SSSCA1O60232 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC12.09□□□□□ -0.47
SSSCA1O60232 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
SSSCA1O60232 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC12.09□□□□□ -0.47
SSSCA1O60232 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
SSSCA1O60232 DDC-213ENST00000617822 1809 ntTSL 3 BASIC12.09□□□□□ -0.47
SSSCA1O60232 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
SSSCA1O60232 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
SSSCA1O60232 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.47
SSSCA1O60232 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
SSSCA1O60232 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
SSSCA1O60232 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
SSSCA1O60232 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
SSSCA1O60232 NAPB-202ENST00000398425 3824 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
SSSCA1O60232 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SSSCA1O60232 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SSSCA1O60232 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC12.08□□□□□ -0.48
SSSCA1O60232 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SSSCA1O60232 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
SSSCA1O60232 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
SSSCA1O60232 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SSSCA1O60232 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC12.08□□□□□ -0.48
SSSCA1O60232 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC12.08□□□□□ -0.48
SSSCA1O60232 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC12.08□□□□□ -0.48
SSSCA1O60232 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC12.08□□□□□ -0.48
SSSCA1O60232 PASK-201ENST00000234040 4572 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
SSSCA1O60232 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
SSSCA1O60232 AC011840.2-201ENST00000563063 1520 ntBASIC12.08□□□□□ -0.48
SSSCA1O60232 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
SSSCA1O60232 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SSSCA1O60232 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
SSSCA1O60232 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC12.08□□□□□ -0.48
SSSCA1O60232 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
SSSCA1O60232 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SSSCA1O60232 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC12.08□□□□□ -0.48
SSSCA1O60232 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
SSSCA1O60232 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SSSCA1O60232 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
SSSCA1O60232 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SSSCA1O60232 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
SSSCA1O60232 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC12.08□□□□□ -0.48
SSSCA1O60232 FAM58DP-201ENST00000428076 619 ntBASIC12.08□□□□□ -0.48
SSSCA1O60232 RBPMS2P1-201ENST00000437762 623 ntBASIC12.08□□□□□ -0.48
SSSCA1O60232 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SSSCA1O60232 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
SSSCA1O60232 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
SSSCA1O60232 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC12.08□□□□□ -0.48
SSSCA1O60232 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
SSSCA1O60232 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC12.08□□□□□ -0.48
SSSCA1O60232 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC12.08□□□□□ -0.48
SSSCA1O60232 RPS15-202ENST00000585665 467 ntTSL 3 BASIC12.08□□□□□ -0.48
SSSCA1O60232 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC12.08□□□□□ -0.48
SSSCA1O60232 AC000095.1-201ENST00000603208 874 ntBASIC12.08□□□□□ -0.48
SSSCA1O60232 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC12.08□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms