Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
TMEM88BA6NKF7 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TMEM88BA6NKF7 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TMEM88BA6NKF7 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TMEM88BA6NKF7 TBC1D3P2-201ENST00000339120 1513 ntTSL 2 BASIC16.71■□□□□ 0.27
TMEM88BA6NKF7 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC16.71■□□□□ 0.27
TMEM88BA6NKF7 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TMEM88BA6NKF7 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TMEM88BA6NKF7 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC16.71■□□□□ 0.27
TMEM88BA6NKF7 AC092135.3-201ENST00000624151 1846 ntBASIC16.71■□□□□ 0.27
TMEM88BA6NKF7 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TMEM88BA6NKF7 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TMEM88BA6NKF7 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
TMEM88BA6NKF7 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TMEM88BA6NKF7 ECHDC2-201ENST00000358358 1126 ntTSL 2 BASIC16.71■□□□□ 0.27
TMEM88BA6NKF7 MIR339-201ENST00000362153 94 ntBASIC16.71■□□□□ 0.27
TMEM88BA6NKF7 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC16.71■□□□□ 0.27
TMEM88BA6NKF7 CFL1P6-201ENST00000400899 494 ntBASIC16.71■□□□□ 0.27
TMEM88BA6NKF7 BX679664.3-201ENST00000414070 555 ntBASIC16.71■□□□□ 0.27
TMEM88BA6NKF7 DLGAP4-AS1-203ENST00000439595 1207 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TMEM88BA6NKF7 AC113935.1-201ENST00000471722 555 ntBASIC16.71■□□□□ 0.27
TMEM88BA6NKF7 TIMM10-202ENST00000525158 530 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
TMEM88BA6NKF7 AL603832.2-201ENST00000566195 2125 ntBASIC16.71■□□□□ 0.27
TMEM88BA6NKF7 AC012617.1-202ENST00000586488 509 ntTSL 2 BASIC16.71■□□□□ 0.27
TMEM88BA6NKF7 AC092327.2-201ENST00000595705 901 ntTSL 3 BASIC16.71■□□□□ 0.27
TMEM88BA6NKF7 AC005746.3-201ENST00000614751 393 ntBASIC16.71■□□□□ 0.27
TMEM88BA6NKF7 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC16.71■□□□□ 0.27
TMEM88BA6NKF7 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TMEM88BA6NKF7 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC16.71■□□□□ 0.27
TMEM88BA6NKF7 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TMEM88BA6NKF7 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TMEM88BA6NKF7 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TMEM88BA6NKF7 AD000864.1-201ENST00000624076 2295 ntBASIC16.71■□□□□ 0.27
TMEM88BA6NKF7 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC16.71■□□□□ 0.27
TMEM88BA6NKF7 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
TMEM88BA6NKF7 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.26
TMEM88BA6NKF7 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
TMEM88BA6NKF7 SHMT1P1-201ENST00000419974 1312 ntBASIC16.7■□□□□ 0.26
TMEM88BA6NKF7 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
TMEM88BA6NKF7 KYAT1-201ENST00000302586 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TMEM88BA6NKF7 AP000845.1-201ENST00000581677 2131 ntBASIC16.7■□□□□ 0.26
TMEM88BA6NKF7 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
TMEM88BA6NKF7 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TMEM88BA6NKF7 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TMEM88BA6NKF7 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TMEM88BA6NKF7 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
TMEM88BA6NKF7 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
TMEM88BA6NKF7 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TMEM88BA6NKF7 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TMEM88BA6NKF7 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TMEM88BA6NKF7 LINC00205-201ENST00000433465 1391 ntTSL 3 BASIC16.7■□□□□ 0.26
TMEM88BA6NKF7 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TMEM88BA6NKF7 VASH2-205ENST00000366967 1206 ntTSL 2 BASIC16.7■□□□□ 0.26
TMEM88BA6NKF7 AL357833.1-201ENST00000413993 832 ntTSL 3 BASIC16.7■□□□□ 0.26
TMEM88BA6NKF7 AC092573.1-201ENST00000433054 884 ntBASIC16.7■□□□□ 0.26
TMEM88BA6NKF7 AC006328.1-201ENST00000437571 379 ntBASIC16.7■□□□□ 0.26
TMEM88BA6NKF7 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TMEM88BA6NKF7 AP000533.1-201ENST00000456143 1177 ntBASIC16.7■□□□□ 0.26
TMEM88BA6NKF7 B9D1-206ENST00000461069 923 ntTSL 2 BASIC16.7■□□□□ 0.26
TMEM88BA6NKF7 SNRPD2P2-201ENST00000473818 333 ntBASIC16.7■□□□□ 0.26
TMEM88BA6NKF7 DPY19L2P4-201ENST00000479881 442 ntBASIC16.7■□□□□ 0.26
TMEM88BA6NKF7 AC008494.1-201ENST00000497612 796 ntBASIC16.7■□□□□ 0.26
TMEM88BA6NKF7 AC112484.2-201ENST00000498297 1298 ntTSL 3 BASIC16.7■□□□□ 0.26
TMEM88BA6NKF7 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TMEM88BA6NKF7 BLOC1S1-203ENST00000548925 571 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TMEM88BA6NKF7 RN7SL556P-201ENST00000582856 298 ntBASIC16.7■□□□□ 0.26
TMEM88BA6NKF7 AP001462.1-201ENST00000594089 452 ntBASIC16.7■□□□□ 0.26
TMEM88BA6NKF7 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC16.7■□□□□ 0.26
TMEM88BA6NKF7 AL080250.1-203ENST00000607799 747 ntTSL 2 BASIC16.7■□□□□ 0.26
TMEM88BA6NKF7 SRP19-208ENST00000621420 1270 ntTSL 3 BASIC16.7■□□□□ 0.26
TMEM88BA6NKF7 NCS1-203ENST00000630865 1092 ntTSL 3 BASIC16.7■□□□□ 0.26
TMEM88BA6NKF7 AC006207.1-201ENST00000637958 562 ntTSL 5 BASIC16.7■□□□□ 0.26
TMEM88BA6NKF7 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TMEM88BA6NKF7 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TMEM88BA6NKF7 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TMEM88BA6NKF7 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TMEM88BA6NKF7 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.7■□□□□ 0.26
TMEM88BA6NKF7 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC16.7■□□□□ 0.26
TMEM88BA6NKF7 BLK-205ENST00000529894 2017 ntTSL 5 BASIC16.7■□□□□ 0.26
TMEM88BA6NKF7 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TMEM88BA6NKF7 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC16.7■□□□□ 0.26
TMEM88BA6NKF7 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC16.7■□□□□ 0.26
TMEM88BA6NKF7 MAD2L1BP-201ENST00000372171 1301 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TMEM88BA6NKF7 PDXDC2P-206ENST00000534700 1315 ntBASIC16.7■□□□□ 0.26
TMEM88BA6NKF7 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC16.69■□□□□ 0.26
TMEM88BA6NKF7 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC16.69■□□□□ 0.26
TMEM88BA6NKF7 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TMEM88BA6NKF7 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
TMEM88BA6NKF7 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TMEM88BA6NKF7 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TMEM88BA6NKF7 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC16.69■□□□□ 0.26
TMEM88BA6NKF7 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
TMEM88BA6NKF7 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC16.69■□□□□ 0.26
TMEM88BA6NKF7 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC16.69■□□□□ 0.26
TMEM88BA6NKF7 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TMEM88BA6NKF7 FAM226B-201ENST00000602508 1490 ntBASIC16.69■□□□□ 0.26
TMEM88BA6NKF7 CLEC20A-202ENST00000623247 1491 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
TMEM88BA6NKF7 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
TMEM88BA6NKF7 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TMEM88BA6NKF7 AC026786.1-201ENST00000540096 1374 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms