Protein–RNA interactions for Protein: A2A3K4

PTPDC1, Protein tyrosine phosphatase domain-containing protein 1, humanhuman

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1A2A3K4 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
PTPDC1A2A3K4 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PTPDC1A2A3K4 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
PTPDC1A2A3K4 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
PTPDC1A2A3K4 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PTPDC1A2A3K4 MIR1247-201ENST00000408206 136 ntBASIC17.35■□□□□ 0.37
PTPDC1A2A3K4 NME6-203ENST00000415644 849 ntTSL 2 BASIC17.35■□□□□ 0.37
PTPDC1A2A3K4 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC17.35■□□□□ 0.37
PTPDC1A2A3K4 AC006033.1-201ENST00000440505 426 ntBASIC17.35■□□□□ 0.37
PTPDC1A2A3K4 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC17.35■□□□□ 0.37
PTPDC1A2A3K4 AL591846.1-201ENST00000451736 433 ntBASIC17.35■□□□□ 0.37
PTPDC1A2A3K4 RPSAP36-202ENST00000494591 1261 ntBASIC17.35■□□□□ 0.37
PTPDC1A2A3K4 MESTP3-201ENST00000503460 968 ntBASIC17.35■□□□□ 0.37
PTPDC1A2A3K4 GCOM2-201ENST00000509133 1104 ntBASIC17.35■□□□□ 0.37
PTPDC1A2A3K4 MIR3615-201ENST00000581999 87 ntBASIC17.35■□□□□ 0.37
PTPDC1A2A3K4 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
PTPDC1A2A3K4 AC005695.3-201ENST00000614522 232 ntBASIC17.35■□□□□ 0.37
PTPDC1A2A3K4 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PTPDC1A2A3K4 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PTPDC1A2A3K4 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
PTPDC1A2A3K4 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
PTPDC1A2A3K4 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PTPDC1A2A3K4 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PTPDC1A2A3K4 AC126755.1-201ENST00000525846 6405 ntBASIC17.35■□□□□ 0.37
PTPDC1A2A3K4 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC17.35■□□□□ 0.37
PTPDC1A2A3K4 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PTPDC1A2A3K4 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
PTPDC1A2A3K4 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC17.35■□□□□ 0.37
PTPDC1A2A3K4 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC17.35■□□□□ 0.37
PTPDC1A2A3K4 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC17.35■□□□□ 0.37
PTPDC1A2A3K4 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
PTPDC1A2A3K4 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
PTPDC1A2A3K4 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PTPDC1A2A3K4 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PTPDC1A2A3K4 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
PTPDC1A2A3K4 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC17.34■□□□□ 0.37
PTPDC1A2A3K4 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PTPDC1A2A3K4 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
PTPDC1A2A3K4 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
PTPDC1A2A3K4 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PTPDC1A2A3K4 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
PTPDC1A2A3K4 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PTPDC1A2A3K4 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
PTPDC1A2A3K4 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC17.34■□□□□ 0.37
PTPDC1A2A3K4 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
PTPDC1A2A3K4 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PTPDC1A2A3K4 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PTPDC1A2A3K4 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PTPDC1A2A3K4 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC17.34■□□□□ 0.37
PTPDC1A2A3K4 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
PTPDC1A2A3K4 AL391280.1-201ENST00000506969 1062 ntBASIC17.34■□□□□ 0.37
PTPDC1A2A3K4 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
PTPDC1A2A3K4 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
PTPDC1A2A3K4 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC17.34■□□□□ 0.37
PTPDC1A2A3K4 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
PTPDC1A2A3K4 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
PTPDC1A2A3K4 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
PTPDC1A2A3K4 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PTPDC1A2A3K4 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC17.34■□□□□ 0.37
PTPDC1A2A3K4 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC17.34■□□□□ 0.37
PTPDC1A2A3K4 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC17.34■□□□□ 0.37
PTPDC1A2A3K4 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC17.34■□□□□ 0.37
PTPDC1A2A3K4 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PTPDC1A2A3K4 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
PTPDC1A2A3K4 AL022328.3-201ENST00000607943 679 ntBASIC17.34■□□□□ 0.37
PTPDC1A2A3K4 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC17.34■□□□□ 0.37
PTPDC1A2A3K4 AC138466.3-201ENST00000619983 221 ntBASIC17.34■□□□□ 0.37
PTPDC1A2A3K4 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PTPDC1A2A3K4 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
PTPDC1A2A3K4 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PTPDC1A2A3K4 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PTPDC1A2A3K4 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PTPDC1A2A3K4 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PTPDC1A2A3K4 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PTPDC1A2A3K4 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
PTPDC1A2A3K4 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC17.33■□□□□ 0.37
PTPDC1A2A3K4 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
PTPDC1A2A3K4 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
PTPDC1A2A3K4 GRK6P1-201ENST00000400595 1711 ntBASIC17.33■□□□□ 0.37
PTPDC1A2A3K4 AL023775.1-201ENST00000454907 1746 ntBASIC17.33■□□□□ 0.37
PTPDC1A2A3K4 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
PTPDC1A2A3K4 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
PTPDC1A2A3K4 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PTPDC1A2A3K4 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
PTPDC1A2A3K4 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PTPDC1A2A3K4 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PTPDC1A2A3K4 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC17.33■□□□□ 0.36
PTPDC1A2A3K4 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PTPDC1A2A3K4 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC17.33■□□□□ 0.36
PTPDC1A2A3K4 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.36
PTPDC1A2A3K4 MRPL37P1-201ENST00000592451 1337 ntBASIC17.33■□□□□ 0.36
PTPDC1A2A3K4 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PTPDC1A2A3K4 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PTPDC1A2A3K4 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PTPDC1A2A3K4 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PTPDC1A2A3K4 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
PTPDC1A2A3K4 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PTPDC1A2A3K4 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PTPDC1A2A3K4 GPAA1P2-201ENST00000417923 928 ntBASIC17.33■□□□□ 0.36
PTPDC1A2A3K4 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 65.6 ms