Protein–RNA interactions for Protein: Q9NUP7

TRMT13, tRNA:m(4)X modification enzyme TRM13 homolog, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRMT13Q9NUP7 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRMT13Q9NUP7 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRMT13Q9NUP7 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRMT13Q9NUP7 ASNA1-201ENST00000357332 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRMT13Q9NUP7 CRIP3-202ENST00000372569 962 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRMT13Q9NUP7 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC16.03■□□□□ 0.16
TRMT13Q9NUP7 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC16.03■□□□□ 0.16
TRMT13Q9NUP7 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC16.03■□□□□ 0.16
TRMT13Q9NUP7 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC16.03■□□□□ 0.16
TRMT13Q9NUP7 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC16.03■□□□□ 0.16
TRMT13Q9NUP7 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC16.03■□□□□ 0.16
TRMT13Q9NUP7 NEU3-207ENST00000534628 746 ntTSL 2 BASIC16.03■□□□□ 0.16
TRMT13Q9NUP7 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC16.03■□□□□ 0.16
TRMT13Q9NUP7 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC16.03■□□□□ 0.16
TRMT13Q9NUP7 AC011472.1-201ENST00000588634 569 ntTSL 4 BASIC16.03■□□□□ 0.16
TRMT13Q9NUP7 SLC27A5-204ENST00000594786 643 ntTSL 2 BASIC16.03■□□□□ 0.16
TRMT13Q9NUP7 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
TRMT13Q9NUP7 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRMT13Q9NUP7 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRMT13Q9NUP7 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
TRMT13Q9NUP7 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRMT13Q9NUP7 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRMT13Q9NUP7 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC16.03■□□□□ 0.16
TRMT13Q9NUP7 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
TRMT13Q9NUP7 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRMT13Q9NUP7 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC16.03■□□□□ 0.16
TRMT13Q9NUP7 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRMT13Q9NUP7 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
TRMT13Q9NUP7 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRMT13Q9NUP7 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC16.03■□□□□ 0.16
TRMT13Q9NUP7 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TRMT13Q9NUP7 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRMT13Q9NUP7 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC16.02■□□□□ 0.16
TRMT13Q9NUP7 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC16.02■□□□□ 0.16
TRMT13Q9NUP7 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRMT13Q9NUP7 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRMT13Q9NUP7 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRMT13Q9NUP7 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC16.02■□□□□ 0.16
TRMT13Q9NUP7 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRMT13Q9NUP7 SLC44A3-209ENST00000532427 1912 ntTSL 2 BASIC16.02■□□□□ 0.16
TRMT13Q9NUP7 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRMT13Q9NUP7 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC16.02■□□□□ 0.16
TRMT13Q9NUP7 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
TRMT13Q9NUP7 RELL1-201ENST00000314117 1326 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRMT13Q9NUP7 FAM69C-202ENST00000400291 1329 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TRMT13Q9NUP7 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRMT13Q9NUP7 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRMT13Q9NUP7 AP002353.1-201ENST00000528257 1599 ntBASIC16.02■□□□□ 0.16
TRMT13Q9NUP7 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRMT13Q9NUP7 C8G-201ENST00000224181 855 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRMT13Q9NUP7 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC16.02■□□□□ 0.16
TRMT13Q9NUP7 ORMDL1-204ENST00000409519 1223 ntTSL 3 BASIC16.02■□□□□ 0.16
TRMT13Q9NUP7 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC16.02■□□□□ 0.16
TRMT13Q9NUP7 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC16.02■□□□□ 0.16
TRMT13Q9NUP7 ST13P19-201ENST00000442505 1124 ntBASIC16.02■□□□□ 0.16
TRMT13Q9NUP7 AC006455.8-201ENST00000451381 351 ntTSL 3 BASIC16.02■□□□□ 0.16
TRMT13Q9NUP7 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC16.02■□□□□ 0.16
TRMT13Q9NUP7 AC012379.2-201ENST00000560237 765 ntTSL 2 BASIC16.02■□□□□ 0.16
TRMT13Q9NUP7 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC16.02■□□□□ 0.16
TRMT13Q9NUP7 AC008758.6-201ENST00000598753 588 ntAPPRIS P1 TSL 4 BASIC16.02■□□□□ 0.16
TRMT13Q9NUP7 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
TRMT13Q9NUP7 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC16.02■□□□□ 0.15
TRMT13Q9NUP7 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TRMT13Q9NUP7 SF1-209ENST00000433274 2317 ntTSL 2 BASIC16.02■□□□□ 0.15
TRMT13Q9NUP7 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
TRMT13Q9NUP7 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
TRMT13Q9NUP7 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TRMT13Q9NUP7 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
TRMT13Q9NUP7 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
TRMT13Q9NUP7 ACE3P-201ENST00000423435 1973 ntBASIC16.02■□□□□ 0.15
TRMT13Q9NUP7 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TRMT13Q9NUP7 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC16.02■□□□□ 0.15
TRMT13Q9NUP7 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC16.02■□□□□ 0.15
TRMT13Q9NUP7 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
TRMT13Q9NUP7 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TRMT13Q9NUP7 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
TRMT13Q9NUP7 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
TRMT13Q9NUP7 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC16.01■□□□□ 0.15
TRMT13Q9NUP7 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRMT13Q9NUP7 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
TRMT13Q9NUP7 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TRMT13Q9NUP7 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TRMT13Q9NUP7 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC16.01■□□□□ 0.15
TRMT13Q9NUP7 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TRMT13Q9NUP7 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
TRMT13Q9NUP7 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRMT13Q9NUP7 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRMT13Q9NUP7 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TRMT13Q9NUP7 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
TRMT13Q9NUP7 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC16.01■□□□□ 0.15
TRMT13Q9NUP7 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TRMT13Q9NUP7 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRMT13Q9NUP7 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRMT13Q9NUP7 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
TRMT13Q9NUP7 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
TRMT13Q9NUP7 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRMT13Q9NUP7 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TRMT13Q9NUP7 PTGES3-203ENST00000436399 941 ntTSL 2 BASIC16.01■□□□□ 0.15
TRMT13Q9NUP7 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC16.01■□□□□ 0.15
TRMT13Q9NUP7 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms