Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
BLOC1S4Q9NUP1 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
BLOC1S4Q9NUP1 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
BLOC1S4Q9NUP1 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
BLOC1S4Q9NUP1 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
BLOC1S4Q9NUP1 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
BLOC1S4Q9NUP1 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
BLOC1S4Q9NUP1 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
BLOC1S4Q9NUP1 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
BLOC1S4Q9NUP1 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
BLOC1S4Q9NUP1 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
BLOC1S4Q9NUP1 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
BLOC1S4Q9NUP1 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
BLOC1S4Q9NUP1 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
BLOC1S4Q9NUP1 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
BLOC1S4Q9NUP1 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
BLOC1S4Q9NUP1 FAS-202ENST00000352159 1722 ntTSL 5 BASIC16.32■□□□□ 0.2
BLOC1S4Q9NUP1 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
BLOC1S4Q9NUP1 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
BLOC1S4Q9NUP1 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
BLOC1S4Q9NUP1 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
BLOC1S4Q9NUP1 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
BLOC1S4Q9NUP1 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
BLOC1S4Q9NUP1 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
BLOC1S4Q9NUP1 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
BLOC1S4Q9NUP1 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC16.32■□□□□ 0.2
BLOC1S4Q9NUP1 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
BLOC1S4Q9NUP1 GAS5-209ENST00000430245 723 ntTSL 3 BASIC16.32■□□□□ 0.2
BLOC1S4Q9NUP1 HSPB1P2-201ENST00000448722 546 ntBASIC16.32■□□□□ 0.2
BLOC1S4Q9NUP1 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
BLOC1S4Q9NUP1 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC16.32■□□□□ 0.2
BLOC1S4Q9NUP1 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC16.32■□□□□ 0.2
BLOC1S4Q9NUP1 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC16.32■□□□□ 0.2
BLOC1S4Q9NUP1 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC16.32■□□□□ 0.2
BLOC1S4Q9NUP1 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
BLOC1S4Q9NUP1 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC16.32■□□□□ 0.2
BLOC1S4Q9NUP1 AL583810.1-201ENST00000553344 1045 ntBASIC16.32■□□□□ 0.2
BLOC1S4Q9NUP1 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC16.32■□□□□ 0.2
BLOC1S4Q9NUP1 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
BLOC1S4Q9NUP1 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC16.32■□□□□ 0.2
BLOC1S4Q9NUP1 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
BLOC1S4Q9NUP1 AC015818.8-201ENST00000587907 1519 ntBASIC16.32■□□□□ 0.2
BLOC1S4Q9NUP1 AL008718.2-201ENST00000609206 1313 ntBASIC16.32■□□□□ 0.2
BLOC1S4Q9NUP1 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
BLOC1S4Q9NUP1 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
BLOC1S4Q9NUP1 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
BLOC1S4Q9NUP1 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
BLOC1S4Q9NUP1 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
BLOC1S4Q9NUP1 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC16.32■□□□□ 0.2
BLOC1S4Q9NUP1 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
BLOC1S4Q9NUP1 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC16.32■□□□□ 0.2
BLOC1S4Q9NUP1 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
BLOC1S4Q9NUP1 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
BLOC1S4Q9NUP1 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
BLOC1S4Q9NUP1 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
BLOC1S4Q9NUP1 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
BLOC1S4Q9NUP1 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
BLOC1S4Q9NUP1 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
BLOC1S4Q9NUP1 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
BLOC1S4Q9NUP1 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
BLOC1S4Q9NUP1 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
BLOC1S4Q9NUP1 GRK6P1-201ENST00000400595 1711 ntBASIC16.31■□□□□ 0.2
BLOC1S4Q9NUP1 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC16.31■□□□□ 0.2
BLOC1S4Q9NUP1 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
BLOC1S4Q9NUP1 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
BLOC1S4Q9NUP1 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
BLOC1S4Q9NUP1 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
BLOC1S4Q9NUP1 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC16.31■□□□□ 0.2
BLOC1S4Q9NUP1 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
BLOC1S4Q9NUP1 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
BLOC1S4Q9NUP1 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
BLOC1S4Q9NUP1 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC16.31■□□□□ 0.2
BLOC1S4Q9NUP1 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC16.31■□□□□ 0.2
BLOC1S4Q9NUP1 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
BLOC1S4Q9NUP1 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
BLOC1S4Q9NUP1 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
BLOC1S4Q9NUP1 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
BLOC1S4Q9NUP1 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
BLOC1S4Q9NUP1 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
BLOC1S4Q9NUP1 AC104506.1-201ENST00000609247 429 ntBASIC16.31■□□□□ 0.2
BLOC1S4Q9NUP1 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC16.31■□□□□ 0.2
BLOC1S4Q9NUP1 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
BLOC1S4Q9NUP1 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC16.31■□□□□ 0.2
BLOC1S4Q9NUP1 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC16.31■□□□□ 0.2
BLOC1S4Q9NUP1 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
BLOC1S4Q9NUP1 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC16.31■□□□□ 0.2
BLOC1S4Q9NUP1 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
BLOC1S4Q9NUP1 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
BLOC1S4Q9NUP1 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
BLOC1S4Q9NUP1 GOLGA8VP-201ENST00000559009 1798 ntBASIC16.31■□□□□ 0.2
BLOC1S4Q9NUP1 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC16.31■□□□□ 0.2
BLOC1S4Q9NUP1 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
BLOC1S4Q9NUP1 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
BLOC1S4Q9NUP1 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
BLOC1S4Q9NUP1 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
BLOC1S4Q9NUP1 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC16.3■□□□□ 0.2
BLOC1S4Q9NUP1 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC16.3■□□□□ 0.2
BLOC1S4Q9NUP1 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
BLOC1S4Q9NUP1 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
BLOC1S4Q9NUP1 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 85.5 ms