Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CHMP6Q96FZ7 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC14.95□□□□□ -0.02
CHMP6Q96FZ7 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC14.95□□□□□ -0.02
CHMP6Q96FZ7 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CHMP6Q96FZ7 MEST-206ENST00000416162 2158 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CHMP6Q96FZ7 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CHMP6Q96FZ7 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC14.95□□□□□ -0.02
CHMP6Q96FZ7 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CHMP6Q96FZ7 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
CHMP6Q96FZ7 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC14.95□□□□□ -0.02
CHMP6Q96FZ7 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC14.95□□□□□ -0.02
CHMP6Q96FZ7 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CHMP6Q96FZ7 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC14.95□□□□□ -0.02
CHMP6Q96FZ7 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
CHMP6Q96FZ7 CLK3P2-201ENST00000427566 1453 ntBASIC14.95□□□□□ -0.02
CHMP6Q96FZ7 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC14.95□□□□□ -0.02
CHMP6Q96FZ7 CES1P1-201ENST00000421606 1704 ntBASIC14.95□□□□□ -0.02
CHMP6Q96FZ7 RAB40A-202ENST00000372633 3126 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
CHMP6Q96FZ7 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CHMP6Q96FZ7 AP002761.4-201ENST00000565433 3361 ntBASIC14.94□□□□□ -0.02
CHMP6Q96FZ7 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
CHMP6Q96FZ7 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
CHMP6Q96FZ7 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CHMP6Q96FZ7 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
CHMP6Q96FZ7 AMT-221ENST00000538581 2038 ntTSL 2 BASIC14.94□□□□□ -0.02
CHMP6Q96FZ7 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
CHMP6Q96FZ7 POLM-201ENST00000242248 2631 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CHMP6Q96FZ7 CD276-202ENST00000318443 3469 ntAPPRIS P2 TSL 2 BASIC14.94□□□□□ -0.02
CHMP6Q96FZ7 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CHMP6Q96FZ7 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
CHMP6Q96FZ7 AC211486.1-202ENST00000416371 468 ntBASIC14.94□□□□□ -0.02
CHMP6Q96FZ7 AC074338.1-201ENST00000416825 156 ntBASIC14.94□□□□□ -0.02
CHMP6Q96FZ7 UPF3AP3-201ENST00000420996 769 ntBASIC14.94□□□□□ -0.02
CHMP6Q96FZ7 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CHMP6Q96FZ7 AL353705.2-201ENST00000428243 662 ntBASIC14.94□□□□□ -0.02
CHMP6Q96FZ7 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
CHMP6Q96FZ7 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CHMP6Q96FZ7 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC14.94□□□□□ -0.02
CHMP6Q96FZ7 AC112482.1-201ENST00000492080 688 ntBASIC14.94□□□□□ -0.02
CHMP6Q96FZ7 AC211476.1-201ENST00000503899 468 ntBASIC14.94□□□□□ -0.02
CHMP6Q96FZ7 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC14.94□□□□□ -0.02
CHMP6Q96FZ7 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CHMP6Q96FZ7 DHDH-204ENST00000523250 634 ntTSL 5 BASIC14.94□□□□□ -0.02
CHMP6Q96FZ7 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC14.94□□□□□ -0.02
CHMP6Q96FZ7 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CHMP6Q96FZ7 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC14.94□□□□□ -0.02
CHMP6Q96FZ7 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CHMP6Q96FZ7 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CHMP6Q96FZ7 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CHMP6Q96FZ7 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CHMP6Q96FZ7 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CHMP6Q96FZ7 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CHMP6Q96FZ7 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC14.94□□□□□ -0.02
CHMP6Q96FZ7 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CHMP6Q96FZ7 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CHMP6Q96FZ7 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CHMP6Q96FZ7 CEP126-201ENST00000263468 7039 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CHMP6Q96FZ7 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
CHMP6Q96FZ7 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC14.94□□□□□ -0.02
CHMP6Q96FZ7 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
CHMP6Q96FZ7 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC14.94□□□□□ -0.02
CHMP6Q96FZ7 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CHMP6Q96FZ7 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
CHMP6Q96FZ7 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
CHMP6Q96FZ7 MANBA-202ENST00000505239 2577 ntTSL 2 BASIC14.93□□□□□ -0.02
CHMP6Q96FZ7 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC14.93□□□□□ -0.02
CHMP6Q96FZ7 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CHMP6Q96FZ7 PELP1-201ENST00000301396 3673 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CHMP6Q96FZ7 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CHMP6Q96FZ7 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CHMP6Q96FZ7 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC14.93□□□□□ -0.02
CHMP6Q96FZ7 ASAP3-202ENST00000437606 2865 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
CHMP6Q96FZ7 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CHMP6Q96FZ7 ZNF721-205ENST00000511833 2966 ntAPPRIS P1 TSL 4 BASIC14.93□□□□□ -0.02
CHMP6Q96FZ7 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CHMP6Q96FZ7 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CHMP6Q96FZ7 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CHMP6Q96FZ7 DNM3-202ENST00000367731 7613 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
CHMP6Q96FZ7 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CHMP6Q96FZ7 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CHMP6Q96FZ7 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CHMP6Q96FZ7 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CHMP6Q96FZ7 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
CHMP6Q96FZ7 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CHMP6Q96FZ7 AC004461.1-201ENST00000412461 403 ntBASIC14.93□□□□□ -0.02
CHMP6Q96FZ7 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC14.93□□□□□ -0.02
CHMP6Q96FZ7 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC14.93□□□□□ -0.02
CHMP6Q96FZ7 RBPMS2P1-201ENST00000437762 623 ntBASIC14.93□□□□□ -0.02
CHMP6Q96FZ7 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
CHMP6Q96FZ7 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC14.93□□□□□ -0.02
CHMP6Q96FZ7 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC14.93□□□□□ -0.02
CHMP6Q96FZ7 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC14.93□□□□□ -0.02
CHMP6Q96FZ7 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
CHMP6Q96FZ7 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC14.93□□□□□ -0.02
CHMP6Q96FZ7 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC14.93□□□□□ -0.02
CHMP6Q96FZ7 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CHMP6Q96FZ7 AC004835.2-201ENST00000603762 682 ntBASIC14.93□□□□□ -0.02
CHMP6Q96FZ7 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CHMP6Q96FZ7 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CHMP6Q96FZ7 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC14.93□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms