Protein–RNA interactions for Protein: Q8NBW4

SLC38A9, Sodium-coupled neutral amino acid transporter 9, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A9Q8NBW4 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
SLC38A9Q8NBW4 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC13.86□□□□□ -0.19
SLC38A9Q8NBW4 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SLC38A9Q8NBW4 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SLC38A9Q8NBW4 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
SLC38A9Q8NBW4 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
SLC38A9Q8NBW4 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
SLC38A9Q8NBW4 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
SLC38A9Q8NBW4 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC13.86□□□□□ -0.19
SLC38A9Q8NBW4 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC13.86□□□□□ -0.19
SLC38A9Q8NBW4 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
SLC38A9Q8NBW4 PARVG-202ENST00000415224 999 ntTSL 2 BASIC13.86□□□□□ -0.19
SLC38A9Q8NBW4 AC007274.2-201ENST00000421675 662 ntBASIC13.86□□□□□ -0.19
SLC38A9Q8NBW4 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SLC38A9Q8NBW4 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC13.86□□□□□ -0.19
SLC38A9Q8NBW4 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
SLC38A9Q8NBW4 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC13.86□□□□□ -0.19
SLC38A9Q8NBW4 CCNC-217ENST00000523985 958 ntTSL 2 BASIC13.86□□□□□ -0.19
SLC38A9Q8NBW4 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC13.86□□□□□ -0.19
SLC38A9Q8NBW4 RBM8B-201ENST00000555532 525 ntBASIC13.86□□□□□ -0.19
SLC38A9Q8NBW4 CENPX-208ENST00000584347 799 ntTSL 2 BASIC13.86□□□□□ -0.19
SLC38A9Q8NBW4 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC13.86□□□□□ -0.19
SLC38A9Q8NBW4 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC13.86□□□□□ -0.19
SLC38A9Q8NBW4 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SLC38A9Q8NBW4 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SLC38A9Q8NBW4 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SLC38A9Q8NBW4 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SLC38A9Q8NBW4 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
SLC38A9Q8NBW4 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SLC38A9Q8NBW4 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
SLC38A9Q8NBW4 AC139712.1-201ENST00000378256 1875 ntBASIC13.86□□□□□ -0.19
SLC38A9Q8NBW4 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SLC38A9Q8NBW4 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC13.86□□□□□ -0.19
SLC38A9Q8NBW4 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SLC38A9Q8NBW4 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SLC38A9Q8NBW4 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SLC38A9Q8NBW4 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SLC38A9Q8NBW4 KRT8P21-201ENST00000430398 1491 ntBASIC13.86□□□□□ -0.19
SLC38A9Q8NBW4 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SLC38A9Q8NBW4 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
SLC38A9Q8NBW4 AC068418.2-201ENST00000577309 3703 ntBASIC13.86□□□□□ -0.19
SLC38A9Q8NBW4 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SLC38A9Q8NBW4 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SLC38A9Q8NBW4 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
SLC38A9Q8NBW4 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SLC38A9Q8NBW4 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC13.85□□□□□ -0.19
SLC38A9Q8NBW4 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
SLC38A9Q8NBW4 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SLC38A9Q8NBW4 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SLC38A9Q8NBW4 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SLC38A9Q8NBW4 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC13.85□□□□□ -0.19
SLC38A9Q8NBW4 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SLC38A9Q8NBW4 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
SLC38A9Q8NBW4 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
SLC38A9Q8NBW4 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC13.85□□□□□ -0.19
SLC38A9Q8NBW4 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC13.85□□□□□ -0.19
SLC38A9Q8NBW4 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SLC38A9Q8NBW4 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC13.85□□□□□ -0.19
SLC38A9Q8NBW4 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SLC38A9Q8NBW4 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SLC38A9Q8NBW4 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
SLC38A9Q8NBW4 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC13.85□□□□□ -0.19
SLC38A9Q8NBW4 EEF1DP6-201ENST00000449232 372 ntBASIC13.85□□□□□ -0.19
SLC38A9Q8NBW4 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC13.85□□□□□ -0.19
SLC38A9Q8NBW4 AC116345.2-201ENST00000512837 523 ntBASIC13.85□□□□□ -0.19
SLC38A9Q8NBW4 RTN3P1-201ENST00000536295 711 ntBASIC13.85□□□□□ -0.19
SLC38A9Q8NBW4 AC242376.1-201ENST00000559033 726 ntBASIC13.85□□□□□ -0.19
SLC38A9Q8NBW4 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC13.85□□□□□ -0.19
SLC38A9Q8NBW4 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC13.85□□□□□ -0.19
SLC38A9Q8NBW4 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
SLC38A9Q8NBW4 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC13.85□□□□□ -0.19
SLC38A9Q8NBW4 AC133540.1-201ENST00000620845 1019 ntBASIC13.85□□□□□ -0.19
SLC38A9Q8NBW4 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC13.85□□□□□ -0.19
SLC38A9Q8NBW4 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC13.85□□□□□ -0.19
SLC38A9Q8NBW4 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC13.85□□□□□ -0.19
SLC38A9Q8NBW4 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
SLC38A9Q8NBW4 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC13.85□□□□□ -0.19
SLC38A9Q8NBW4 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SLC38A9Q8NBW4 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
SLC38A9Q8NBW4 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
SLC38A9Q8NBW4 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SLC38A9Q8NBW4 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SLC38A9Q8NBW4 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC13.85□□□□□ -0.19
SLC38A9Q8NBW4 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC13.85□□□□□ -0.19
SLC38A9Q8NBW4 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC13.85□□□□□ -0.19
SLC38A9Q8NBW4 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC13.85□□□□□ -0.19
SLC38A9Q8NBW4 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC13.85□□□□□ -0.19
SLC38A9Q8NBW4 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC13.85□□□□□ -0.19
SLC38A9Q8NBW4 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC13.85□□□□□ -0.19
SLC38A9Q8NBW4 AP002414.2-201ENST00000591780 3365 ntBASIC13.85□□□□□ -0.19
SLC38A9Q8NBW4 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SLC38A9Q8NBW4 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SLC38A9Q8NBW4 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC13.84□□□□□ -0.19
SLC38A9Q8NBW4 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
SLC38A9Q8NBW4 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC13.84□□□□□ -0.19
SLC38A9Q8NBW4 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SLC38A9Q8NBW4 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SLC38A9Q8NBW4 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SLC38A9Q8NBW4 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SLC38A9Q8NBW4 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 59.2 ms