Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
TTC9CQ8N5M4 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC11.72□□□□□ -0.53
TTC9CQ8N5M4 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC11.72□□□□□ -0.53
TTC9CQ8N5M4 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
TTC9CQ8N5M4 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC11.72□□□□□ -0.53
TTC9CQ8N5M4 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
TTC9CQ8N5M4 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
TTC9CQ8N5M4 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
TTC9CQ8N5M4 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
TTC9CQ8N5M4 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
TTC9CQ8N5M4 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
TTC9CQ8N5M4 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
TTC9CQ8N5M4 AP000593.2-201ENST00000542775 1433 ntBASIC11.72□□□□□ -0.53
TTC9CQ8N5M4 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC11.72□□□□□ -0.53
TTC9CQ8N5M4 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC11.72□□□□□ -0.53
TTC9CQ8N5M4 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
TTC9CQ8N5M4 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
TTC9CQ8N5M4 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
TTC9CQ8N5M4 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC11.72□□□□□ -0.53
TTC9CQ8N5M4 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
TTC9CQ8N5M4 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC11.72□□□□□ -0.53
TTC9CQ8N5M4 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
TTC9CQ8N5M4 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
TTC9CQ8N5M4 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
TTC9CQ8N5M4 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
TTC9CQ8N5M4 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
TTC9CQ8N5M4 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
TTC9CQ8N5M4 CALY-203ENST00000368558 825 ntTSL 5 BASIC11.72□□□□□ -0.53
TTC9CQ8N5M4 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
TTC9CQ8N5M4 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC11.72□□□□□ -0.53
TTC9CQ8N5M4 CD8B2-202ENST00000417670 633 ntBASIC11.72□□□□□ -0.53
TTC9CQ8N5M4 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC11.72□□□□□ -0.53
TTC9CQ8N5M4 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
TTC9CQ8N5M4 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC11.72□□□□□ -0.53
TTC9CQ8N5M4 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
TTC9CQ8N5M4 LHX6-205ENST00000464484 666 ntTSL 2 BASIC11.72□□□□□ -0.53
TTC9CQ8N5M4 TAF8-206ENST00000472818 719 ntTSL 2 BASIC11.72□□□□□ -0.53
TTC9CQ8N5M4 USP32P1-208ENST00000506594 1164 ntBASIC11.72□□□□□ -0.53
TTC9CQ8N5M4 ALG3P1-201ENST00000508806 1114 ntBASIC11.72□□□□□ -0.53
TTC9CQ8N5M4 GCOM2-201ENST00000509133 1104 ntBASIC11.72□□□□□ -0.53
TTC9CQ8N5M4 RNA5SP486-201ENST00000515961 83 ntBASIC11.72□□□□□ -0.53
TTC9CQ8N5M4 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC11.72□□□□□ -0.53
TTC9CQ8N5M4 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC11.72□□□□□ -0.53
TTC9CQ8N5M4 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC11.72□□□□□ -0.53
TTC9CQ8N5M4 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
TTC9CQ8N5M4 RPL28-206ENST00000558752 671 ntTSL 3 BASIC11.72□□□□□ -0.53
TTC9CQ8N5M4 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC11.72□□□□□ -0.53
TTC9CQ8N5M4 GNRHR2-203ENST00000581100 1187 ntBASIC11.72□□□□□ -0.53
TTC9CQ8N5M4 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC11.72□□□□□ -0.53
TTC9CQ8N5M4 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC11.72□□□□□ -0.53
TTC9CQ8N5M4 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC11.72□□□□□ -0.53
TTC9CQ8N5M4 AC008735.3-201ENST00000596646 500 ntBASIC11.72□□□□□ -0.53
TTC9CQ8N5M4 BX088702.1-201ENST00000610784 235 ntBASIC11.72□□□□□ -0.53
TTC9CQ8N5M4 SRP9-204ENST00000619790 377 ntTSL 2 BASIC11.72□□□□□ -0.53
TTC9CQ8N5M4 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC11.72□□□□□ -0.53
TTC9CQ8N5M4 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC11.72□□□□□ -0.53
TTC9CQ8N5M4 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC11.72□□□□□ -0.53
TTC9CQ8N5M4 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC11.72□□□□□ -0.53
TTC9CQ8N5M4 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
TTC9CQ8N5M4 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC11.72□□□□□ -0.53
TTC9CQ8N5M4 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
TTC9CQ8N5M4 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
TTC9CQ8N5M4 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
TTC9CQ8N5M4 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
TTC9CQ8N5M4 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC11.72□□□□□ -0.53
TTC9CQ8N5M4 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
TTC9CQ8N5M4 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
TTC9CQ8N5M4 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC11.72□□□□□ -0.53
TTC9CQ8N5M4 AP001267.2-201ENST00000532619 2086 ntBASIC11.72□□□□□ -0.53
TTC9CQ8N5M4 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC11.72□□□□□ -0.53
TTC9CQ8N5M4 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC11.72□□□□□ -0.53
TTC9CQ8N5M4 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC11.72□□□□□ -0.53
TTC9CQ8N5M4 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC11.72□□□□□ -0.53
TTC9CQ8N5M4 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
TTC9CQ8N5M4 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC11.72□□□□□ -0.53
TTC9CQ8N5M4 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
TTC9CQ8N5M4 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC11.72□□□□□ -0.53
TTC9CQ8N5M4 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC11.72□□□□□ -0.53
TTC9CQ8N5M4 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
TTC9CQ8N5M4 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC11.71□□□□□ -0.53
TTC9CQ8N5M4 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
TTC9CQ8N5M4 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC11.71□□□□□ -0.53
TTC9CQ8N5M4 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
TTC9CQ8N5M4 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
TTC9CQ8N5M4 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
TTC9CQ8N5M4 AC011840.2-201ENST00000563063 1520 ntBASIC11.71□□□□□ -0.53
TTC9CQ8N5M4 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC11.71□□□□□ -0.53
TTC9CQ8N5M4 CR383656.2-201ENST00000548656 2254 ntBASIC11.71□□□□□ -0.53
TTC9CQ8N5M4 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
TTC9CQ8N5M4 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
TTC9CQ8N5M4 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
TTC9CQ8N5M4 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
TTC9CQ8N5M4 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
TTC9CQ8N5M4 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC11.71□□□□□ -0.53
TTC9CQ8N5M4 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
TTC9CQ8N5M4 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC11.71□□□□□ -0.53
TTC9CQ8N5M4 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC11.71□□□□□ -0.53
TTC9CQ8N5M4 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC11.71□□□□□ -0.53
TTC9CQ8N5M4 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
TTC9CQ8N5M4 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms