Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CASC4Q6P4E1 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CASC4Q6P4E1 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CASC4Q6P4E1 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CASC4Q6P4E1 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CASC4Q6P4E1 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CASC4Q6P4E1 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC15.15■□□□□ 0.02
CASC4Q6P4E1 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CASC4Q6P4E1 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
CASC4Q6P4E1 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC15.14■□□□□ 0.01
CASC4Q6P4E1 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
CASC4Q6P4E1 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CASC4Q6P4E1 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
CASC4Q6P4E1 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC15.14■□□□□ 0.01
CASC4Q6P4E1 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC15.14■□□□□ 0.01
CASC4Q6P4E1 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CASC4Q6P4E1 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
CASC4Q6P4E1 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC15.14■□□□□ 0.01
CASC4Q6P4E1 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CASC4Q6P4E1 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
CASC4Q6P4E1 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CASC4Q6P4E1 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
CASC4Q6P4E1 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC15.14■□□□□ 0.01
CASC4Q6P4E1 MTUS1-204ENST00000381869 6256 ntTSL 5 BASIC15.14■□□□□ 0.01
CASC4Q6P4E1 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CASC4Q6P4E1 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC15.14■□□□□ 0.01
CASC4Q6P4E1 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CASC4Q6P4E1 AC041040.2-201ENST00000622926 2899 ntBASIC15.14■□□□□ 0.01
CASC4Q6P4E1 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CASC4Q6P4E1 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CASC4Q6P4E1 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CASC4Q6P4E1 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC15.14■□□□□ 0.01
CASC4Q6P4E1 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CASC4Q6P4E1 AC007969.1-201ENST00000433675 447 ntBASIC15.14■□□□□ 0.01
CASC4Q6P4E1 GIMAP3P-201ENST00000495150 836 ntBASIC15.14■□□□□ 0.01
CASC4Q6P4E1 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
CASC4Q6P4E1 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC15.14■□□□□ 0.01
CASC4Q6P4E1 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC15.14■□□□□ 0.01
CASC4Q6P4E1 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC15.14■□□□□ 0.01
CASC4Q6P4E1 METTL26-214ENST00000614890 801 ntTSL 3 BASIC15.14■□□□□ 0.01
CASC4Q6P4E1 AP005019.2-201ENST00000615104 511 ntBASIC15.14■□□□□ 0.01
CASC4Q6P4E1 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC15.14■□□□□ 0.01
CASC4Q6P4E1 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC15.14■□□□□ 0.01
CASC4Q6P4E1 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC15.14■□□□□ 0.01
CASC4Q6P4E1 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CASC4Q6P4E1 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
CASC4Q6P4E1 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CASC4Q6P4E1 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CASC4Q6P4E1 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
CASC4Q6P4E1 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CASC4Q6P4E1 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC15.14■□□□□ 0.01
CASC4Q6P4E1 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CASC4Q6P4E1 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
CASC4Q6P4E1 NCOA7-203ENST00000392477 6457 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
CASC4Q6P4E1 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC15.14■□□□□ 0.01
CASC4Q6P4E1 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
CASC4Q6P4E1 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CASC4Q6P4E1 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC15.13■□□□□ 0.01
CASC4Q6P4E1 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CASC4Q6P4E1 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CASC4Q6P4E1 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
CASC4Q6P4E1 HNRNPA1P48-201ENST00000562726 1377 ntBASIC15.13■□□□□ 0.01
CASC4Q6P4E1 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CASC4Q6P4E1 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
CASC4Q6P4E1 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC15.13■□□□□ 0.01
CASC4Q6P4E1 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
CASC4Q6P4E1 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CASC4Q6P4E1 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
CASC4Q6P4E1 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CASC4Q6P4E1 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC15.13■□□□□ 0.01
CASC4Q6P4E1 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CASC4Q6P4E1 MIR770-201ENST00000390219 98 ntBASIC15.13■□□□□ 0.01
CASC4Q6P4E1 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
CASC4Q6P4E1 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC15.13■□□□□ 0.01
CASC4Q6P4E1 EIF3FP3-201ENST00000434851 1086 ntBASIC15.13■□□□□ 0.01
CASC4Q6P4E1 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC15.13■□□□□ 0.01
CASC4Q6P4E1 TSPY16P-201ENST00000449843 468 ntBASIC15.13■□□□□ 0.01
CASC4Q6P4E1 KRT18P25-201ENST00000508931 1278 ntBASIC15.13■□□□□ 0.01
CASC4Q6P4E1 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
CASC4Q6P4E1 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC15.13■□□□□ 0.01
CASC4Q6P4E1 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC15.13■□□□□ 0.01
CASC4Q6P4E1 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC15.13■□□□□ 0.01
CASC4Q6P4E1 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC15.13■□□□□ 0.01
CASC4Q6P4E1 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
CASC4Q6P4E1 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC15.13■□□□□ 0.01
CASC4Q6P4E1 CHCHD2P3-201ENST00000603038 451 ntBASIC15.13■□□□□ 0.01
CASC4Q6P4E1 TMEM261P1-201ENST00000604899 340 ntBASIC15.13■□□□□ 0.01
CASC4Q6P4E1 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CASC4Q6P4E1 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC15.13■□□□□ 0.01
CASC4Q6P4E1 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CASC4Q6P4E1 AL603764.1-201ENST00000636452 321 ntBASIC15.13■□□□□ 0.01
CASC4Q6P4E1 THBS2-201ENST00000366787 5811 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CASC4Q6P4E1 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
CASC4Q6P4E1 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CASC4Q6P4E1 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
CASC4Q6P4E1 AGER-206ENST00000375070 1463 ntTSL 5 BASIC15.13■□□□□ 0.01
CASC4Q6P4E1 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CASC4Q6P4E1 CACNA1G-208ENST00000442258 7226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CASC4Q6P4E1 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
CASC4Q6P4E1 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms