Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC15.66■□□□□ 0.1
VARS2Q5ST30 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC15.66■□□□□ 0.1
VARS2Q5ST30 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC15.66■□□□□ 0.1
VARS2Q5ST30 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
VARS2Q5ST30 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VARS2Q5ST30 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VARS2Q5ST30 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VARS2Q5ST30 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
VARS2Q5ST30 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
VARS2Q5ST30 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
VARS2Q5ST30 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC15.66■□□□□ 0.1
VARS2Q5ST30 AC092978.1-202ENST00000637590 1327 ntBASIC15.66■□□□□ 0.1
VARS2Q5ST30 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VARS2Q5ST30 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
VARS2Q5ST30 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC15.66■□□□□ 0.1
VARS2Q5ST30 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
VARS2Q5ST30 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VARS2Q5ST30 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
VARS2Q5ST30 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
VARS2Q5ST30 SLC9A7P1-201ENST00000554295 3311 ntBASIC15.65■□□□□ 0.1
VARS2Q5ST30 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
VARS2Q5ST30 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
VARS2Q5ST30 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
VARS2Q5ST30 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
VARS2Q5ST30 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
VARS2Q5ST30 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC15.65■□□□□ 0.1
VARS2Q5ST30 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
VARS2Q5ST30 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
VARS2Q5ST30 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
VARS2Q5ST30 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC15.65■□□□□ 0.1
VARS2Q5ST30 TIMM10-201ENST00000257245 680 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
VARS2Q5ST30 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
VARS2Q5ST30 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC15.65■□□□□ 0.1
VARS2Q5ST30 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC15.65■□□□□ 0.1
VARS2Q5ST30 HNRNPA1P27-201ENST00000412087 955 ntBASIC15.65■□□□□ 0.1
VARS2Q5ST30 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC15.65■□□□□ 0.1
VARS2Q5ST30 RPL17P11-201ENST00000417593 544 ntBASIC15.65■□□□□ 0.1
VARS2Q5ST30 ISCA2P1-201ENST00000425548 448 ntBASIC15.65■□□□□ 0.1
VARS2Q5ST30 AC093581.1-204ENST00000442606 390 ntTSL 3 BASIC15.65■□□□□ 0.1
VARS2Q5ST30 AC006335.1-201ENST00000445200 547 ntBASIC15.65■□□□□ 0.1
VARS2Q5ST30 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC15.65■□□□□ 0.1
VARS2Q5ST30 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC15.65■□□□□ 0.1
VARS2Q5ST30 RBM8B-201ENST00000555532 525 ntBASIC15.65■□□□□ 0.1
VARS2Q5ST30 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC15.65■□□□□ 0.1
VARS2Q5ST30 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
VARS2Q5ST30 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
VARS2Q5ST30 AF254983.2-201ENST00000612331 135 ntBASIC15.65■□□□□ 0.1
VARS2Q5ST30 AC005332.10-201ENST00000612725 619 ntBASIC15.65■□□□□ 0.1
VARS2Q5ST30 AC087821.1-201ENST00000623639 567 ntBASIC15.65■□□□□ 0.1
VARS2Q5ST30 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
VARS2Q5ST30 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC15.65■□□□□ 0.1
VARS2Q5ST30 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
VARS2Q5ST30 CYP4F23P-201ENST00000593402 1579 ntBASIC15.65■□□□□ 0.1
VARS2Q5ST30 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
VARS2Q5ST30 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
VARS2Q5ST30 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
VARS2Q5ST30 AL117378.2-201ENST00000622916 1337 ntBASIC15.65■□□□□ 0.1
VARS2Q5ST30 LINC00528-201ENST00000600723 2160 ntBASIC15.65■□□□□ 0.1
VARS2Q5ST30 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
VARS2Q5ST30 FES-204ENST00000414248 2327 ntTSL 2 BASIC15.65■□□□□ 0.1
VARS2Q5ST30 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
VARS2Q5ST30 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
VARS2Q5ST30 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.1
VARS2Q5ST30 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
VARS2Q5ST30 FER1L4-210ENST00000615531 5998 ntBASIC15.64■□□□□ 0.09
VARS2Q5ST30 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
VARS2Q5ST30 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
VARS2Q5ST30 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
VARS2Q5ST30 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC15.64■□□□□ 0.09
VARS2Q5ST30 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC15.64■□□□□ 0.09
VARS2Q5ST30 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
VARS2Q5ST30 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
VARS2Q5ST30 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
VARS2Q5ST30 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
VARS2Q5ST30 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
VARS2Q5ST30 AL357833.2-202ENST00000413757 372 ntTSL 3 BASIC15.64■□□□□ 0.09
VARS2Q5ST30 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC15.64■□□□□ 0.09
VARS2Q5ST30 FTLP1-201ENST00000449155 526 ntBASIC15.64■□□□□ 0.09
VARS2Q5ST30 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
VARS2Q5ST30 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
VARS2Q5ST30 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
VARS2Q5ST30 AC134698.3-201ENST00000523880 214 ntBASIC15.64■□□□□ 0.09
VARS2Q5ST30 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC15.64■□□□□ 0.09
VARS2Q5ST30 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC15.64■□□□□ 0.09
VARS2Q5ST30 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC15.64■□□□□ 0.09
VARS2Q5ST30 AC133552.4-201ENST00000576103 676 ntBASIC15.64■□□□□ 0.09
VARS2Q5ST30 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
VARS2Q5ST30 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
VARS2Q5ST30 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
VARS2Q5ST30 AL353726.2-201ENST00000623259 884 ntBASIC15.64■□□□□ 0.09
VARS2Q5ST30 AL590440.2-201ENST00000641973 1595 ntBASIC15.64■□□□□ 0.09
VARS2Q5ST30 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
VARS2Q5ST30 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC15.64■□□□□ 0.09
VARS2Q5ST30 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
VARS2Q5ST30 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC15.64■□□□□ 0.09
VARS2Q5ST30 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
VARS2Q5ST30 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
VARS2Q5ST30 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
VARS2Q5ST30 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC15.63■□□□□ 0.09
VARS2Q5ST30 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms