Protein–RNA interactions for Protein: Q08945

SSRP1, FACT complex subunit SSRP1, humanhuman

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1Q08945 HOMER2P2-201ENST00000451621 847 ntBASIC17.13■□□□□ 0.33
SSRP1Q08945 GPR53P-205ENST00000457298 1084 ntBASIC17.13■□□□□ 0.33
SSRP1Q08945 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC17.13■□□□□ 0.33
SSRP1Q08945 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC17.13■□□□□ 0.33
SSRP1Q08945 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC17.13■□□□□ 0.33
SSRP1Q08945 AC008687.7-202ENST00000637404 953 ntBASIC17.13■□□□□ 0.33
SSRP1Q08945 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SSRP1Q08945 AL590440.2-201ENST00000641973 1595 ntBASIC17.13■□□□□ 0.33
SSRP1Q08945 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SSRP1Q08945 UCKL1-AS1-201ENST00000623569 3602 ntBASIC17.13■□□□□ 0.33
SSRP1Q08945 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SSRP1Q08945 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC17.13■□□□□ 0.33
SSRP1Q08945 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
SSRP1Q08945 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
SSRP1Q08945 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC17.13■□□□□ 0.33
SSRP1Q08945 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
SSRP1Q08945 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SSRP1Q08945 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC17.12■□□□□ 0.33
SSRP1Q08945 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC17.12■□□□□ 0.33
SSRP1Q08945 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SSRP1Q08945 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SSRP1Q08945 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC17.12■□□□□ 0.33
SSRP1Q08945 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SSRP1Q08945 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
SSRP1Q08945 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC17.12■□□□□ 0.33
SSRP1Q08945 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
SSRP1Q08945 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
SSRP1Q08945 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SSRP1Q08945 TNN-203ENST00000622870 3719 ntTSL 5 BASIC17.12■□□□□ 0.33
SSRP1Q08945 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SSRP1Q08945 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC17.12■□□□□ 0.33
SSRP1Q08945 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SSRP1Q08945 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
SSRP1Q08945 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SSRP1Q08945 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SSRP1Q08945 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC17.12■□□□□ 0.33
SSRP1Q08945 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC17.12■□□□□ 0.33
SSRP1Q08945 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SSRP1Q08945 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC17.12■□□□□ 0.33
SSRP1Q08945 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC17.12■□□□□ 0.33
SSRP1Q08945 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC17.12■□□□□ 0.33
SSRP1Q08945 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC17.12■□□□□ 0.33
SSRP1Q08945 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
SSRP1Q08945 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC17.12■□□□□ 0.33
SSRP1Q08945 HILS1-202ENST00000545329 423 ntBASIC17.12■□□□□ 0.33
SSRP1Q08945 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC17.12■□□□□ 0.33
SSRP1Q08945 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC17.12■□□□□ 0.33
SSRP1Q08945 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
SSRP1Q08945 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC17.12■□□□□ 0.33
SSRP1Q08945 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
SSRP1Q08945 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SSRP1Q08945 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SSRP1Q08945 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC17.12■□□□□ 0.33
SSRP1Q08945 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
SSRP1Q08945 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SSRP1Q08945 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SSRP1Q08945 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SSRP1Q08945 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
SSRP1Q08945 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SSRP1Q08945 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
SSRP1Q08945 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SSRP1Q08945 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC17.12■□□□□ 0.33
SSRP1Q08945 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SSRP1Q08945 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
SSRP1Q08945 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC17.12■□□□□ 0.33
SSRP1Q08945 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC17.12■□□□□ 0.33
SSRP1Q08945 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC17.11■□□□□ 0.33
SSRP1Q08945 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC17.11■□□□□ 0.33
SSRP1Q08945 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
SSRP1Q08945 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SSRP1Q08945 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
SSRP1Q08945 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SSRP1Q08945 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SSRP1Q08945 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SSRP1Q08945 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC17.11■□□□□ 0.33
SSRP1Q08945 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
SSRP1Q08945 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC17.11■□□□□ 0.33
SSRP1Q08945 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
SSRP1Q08945 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
SSRP1Q08945 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC17.11■□□□□ 0.33
SSRP1Q08945 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SSRP1Q08945 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
SSRP1Q08945 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
SSRP1Q08945 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC17.11■□□□□ 0.33
SSRP1Q08945 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC17.11■□□□□ 0.33
SSRP1Q08945 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC17.11■□□□□ 0.33
SSRP1Q08945 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
SSRP1Q08945 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SSRP1Q08945 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC17.11■□□□□ 0.33
SSRP1Q08945 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC17.11■□□□□ 0.33
SSRP1Q08945 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC17.11■□□□□ 0.33
SSRP1Q08945 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC17.11■□□□□ 0.33
SSRP1Q08945 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC17.11■□□□□ 0.33
SSRP1Q08945 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SSRP1Q08945 AP006547.1-201ENST00000563435 692 ntBASIC17.11■□□□□ 0.33
SSRP1Q08945 HNRNPA1P48-202ENST00000565308 961 ntBASIC17.11■□□□□ 0.33
SSRP1Q08945 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC17.11■□□□□ 0.33
SSRP1Q08945 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC17.11■□□□□ 0.33
SSRP1Q08945 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC17.11■□□□□ 0.33
SSRP1Q08945 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 62.8 ms