Protein–RNA interactions for Protein: Q07654

TFF3, Trefoil factor 3, humanhuman

Predictions only

Length 80 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3Q07654 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
TFF3Q07654 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TFF3Q07654 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TFF3Q07654 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
TFF3Q07654 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
TFF3Q07654 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
TFF3Q07654 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TFF3Q07654 TMBIM7P-203ENST00000641617 1718 ntBASIC12.97□□□□□ -0.33
TFF3Q07654 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
TFF3Q07654 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
TFF3Q07654 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC12.97□□□□□ -0.33
TFF3Q07654 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
TFF3Q07654 NME2-201ENST00000393183 568 ntTSL 2 BASIC12.97□□□□□ -0.33
TFF3Q07654 AL627231.1-201ENST00000394467 1125 ntBASIC12.97□□□□□ -0.33
TFF3Q07654 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC12.97□□□□□ -0.33
TFF3Q07654 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC12.97□□□□□ -0.33
TFF3Q07654 AL355334.1-201ENST00000417713 215 ntBASIC12.97□□□□□ -0.33
TFF3Q07654 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
TFF3Q07654 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC12.97□□□□□ -0.33
TFF3Q07654 SKA2-202ENST00000437036 625 ntTSL 2 BASIC12.97□□□□□ -0.33
TFF3Q07654 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC12.97□□□□□ -0.33
TFF3Q07654 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC12.97□□□□□ -0.33
TFF3Q07654 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC12.97□□□□□ -0.33
TFF3Q07654 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
TFF3Q07654 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC12.97□□□□□ -0.33
TFF3Q07654 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC12.97□□□□□ -0.33
TFF3Q07654 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
TFF3Q07654 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC12.97□□□□□ -0.33
TFF3Q07654 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
TFF3Q07654 AC087045.2-201ENST00000606279 1003 ntBASIC12.97□□□□□ -0.33
TFF3Q07654 AC092171.5-201ENST00000608012 942 ntBASIC12.97□□□□□ -0.33
TFF3Q07654 MEG3_2.1-201ENST00000611456 105 ntBASIC12.97□□□□□ -0.33
TFF3Q07654 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC12.97□□□□□ -0.33
TFF3Q07654 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC12.97□□□□□ -0.33
TFF3Q07654 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC12.97□□□□□ -0.33
TFF3Q07654 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TFF3Q07654 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
TFF3Q07654 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TFF3Q07654 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TFF3Q07654 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
TFF3Q07654 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC12.97□□□□□ -0.33
TFF3Q07654 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TFF3Q07654 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC12.97□□□□□ -0.33
TFF3Q07654 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC12.97□□□□□ -0.33
TFF3Q07654 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC12.97□□□□□ -0.33
TFF3Q07654 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TFF3Q07654 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
TFF3Q07654 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TFF3Q07654 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
TFF3Q07654 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC12.97□□□□□ -0.33
TFF3Q07654 AC003102.2-201ENST00000589195 1469 ntBASIC12.97□□□□□ -0.33
TFF3Q07654 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
TFF3Q07654 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TFF3Q07654 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TFF3Q07654 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC12.97□□□□□ -0.33
TFF3Q07654 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TFF3Q07654 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TFF3Q07654 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC12.96□□□□□ -0.33
TFF3Q07654 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TFF3Q07654 API5-202ENST00000420461 2009 ntTSL 2 BASIC12.96□□□□□ -0.33
TFF3Q07654 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TFF3Q07654 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TFF3Q07654 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TFF3Q07654 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TFF3Q07654 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TFF3Q07654 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TFF3Q07654 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC12.96□□□□□ -0.33
TFF3Q07654 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC12.96□□□□□ -0.33
TFF3Q07654 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TFF3Q07654 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TFF3Q07654 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.33
TFF3Q07654 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
TFF3Q07654 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TFF3Q07654 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
TFF3Q07654 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
TFF3Q07654 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TFF3Q07654 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
TFF3Q07654 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
TFF3Q07654 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
TFF3Q07654 OR2K2-202ENST00000374428 1038 ntBASIC12.96□□□□□ -0.33
TFF3Q07654 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TFF3Q07654 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TFF3Q07654 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC12.96□□□□□ -0.33
TFF3Q07654 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC12.96□□□□□ -0.33
TFF3Q07654 AC078991.1-201ENST00000437297 610 ntBASIC12.96□□□□□ -0.33
TFF3Q07654 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC12.96□□□□□ -0.33
TFF3Q07654 CFL1-206ENST00000527344 962 ntTSL 2 BASIC12.96□□□□□ -0.33
TFF3Q07654 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
TFF3Q07654 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
TFF3Q07654 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC12.96□□□□□ -0.33
TFF3Q07654 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TFF3Q07654 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
TFF3Q07654 AC026803.1-201ENST00000569130 274 ntBASIC12.96□□□□□ -0.33
TFF3Q07654 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC12.96□□□□□ -0.33
TFF3Q07654 AC103810.10-201ENST00000606504 343 ntBASIC12.96□□□□□ -0.33
TFF3Q07654 AL157813.1-201ENST00000612996 587 ntBASIC12.96□□□□□ -0.33
TFF3Q07654 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC12.96□□□□□ -0.33
TFF3Q07654 GSN-203ENST00000373808 2664 ntTSL 2 BASIC12.96□□□□□ -0.33
TFF3Q07654 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TFF3Q07654 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC12.96□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms